Gene VIBHAR_03417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03417 
Symbol 
ID5556157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3457304 
End bp3458641 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content49% 
IMG OID640908898 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_001446590 
Protein GI156975682 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCCA CTTGGTCCGA GCAATCAAAA GAGGATAACC CCATGACCAA ATCATCAGAG 
CTATATCAAA AGGCTCAGCA AACCATTCCT GGCGGTGTGA ACTCACCAGT TCGTGCATTC
AACGGCGTTG GCGGTTCTCC GCTATTTATC GAACGAGCAG ACGGTGCACT GATTTTTGAT
GCCGATGGTA AAGCGTACAT TGATTACGTT GGCTCTTGGG GTCCAATGAT TCTAGGTCAT
AACCACGCGG TTATCCGTGA AGCTGTTATC GATGCTGCAC AACGTGGCCT GAGTTTTGGT
GCGCCAACTG AAATGGAAAT TGCCATGGCT GAGCTAGTGT CTGAGCTAGT GCCATCAATG
GAACAAATCC GCATGGTGAG CTCTGGTACA GAAGCGACCA TGAGTGCTAT CCGTCTTGCT
CGTGGCTTTA CTGGCCGTGA CAAAATCATG AAGTTTGAAG GCTGTTACCA CGGTCACGCA
GACAGCTTGC TAGTAAAAGC TGGCTCTGGT GCACTAACTC TTGGCCAACC AAGTTCTCCT
GGCGTTCCTG CTGACTTTGC TAAGCACACA CTAACCGCAA CATTCAACGA TCTAGGTTCA
GTACGTGAGT TGTTCGCAGC AAACAAAGGC GAGATCGCAT GTATCATCGT TGAACCAGTA
GCGGGCAACA TGAACTGTAT CCCACCAGTA GAAGGTTTCC ACGAAGGTCT ACGTGAAATC
TGTGACCAAG AAGGTGCACT ACTGATTTTT GATGAAGTAA TGACTGGCTT CCGCGTAGCA
CTAGGCGGCG CACAAGCACA CTACAACATC AAGCCTGATC TAACGACGCT AGGTAAAGTA
ATCGGTGGCG GTATGCCAGT AGGTGCTTTC GGTGGTCGTA AAGAAGTCAT GCAATACGTT
GCGCCAACAG GCCCAGTTTA CCAAGCTGGC ACACTTTCAG GTAACCCAGT AGCAATGGCT
GCGGGCTTTG CATGTTTGAA CCTGCTAAAA GAAGAAGGCA ACGAGAAACG TCTTGCAGCA
AAAACCAAAC AACTTGCTGA AGGCTTCAAA GTACTGGCAG AAAAGCACGG TATCCCAATG
GTAGTAAACC AAGTGGGCGG CATGTTTGGC TTCTTCTTCA CTGACCAAGA AACCGTCACT
TGCTACGAAG ACGTGACTAA GTGCGATGTC GAGCGCTTCA AGCGTTTCTT CCACCTAATG
CTAAAACACG GTGTATACCT TGCACCATCA GCATTCGAAG CGAGCTTTAC TTCTCTTGCT
CACGGTTCAA AAGAAATCGA TGCAACACTA GAAGCTGCTG ATCGCTGTTT CGCAATTCTG
GCTGAAGAAG CAAAATAA
 
Protein sequence
MRSTWSEQSK EDNPMTKSSE LYQKAQQTIP GGVNSPVRAF NGVGGSPLFI ERADGALIFD 
ADGKAYIDYV GSWGPMILGH NHAVIREAVI DAAQRGLSFG APTEMEIAMA ELVSELVPSM
EQIRMVSSGT EATMSAIRLA RGFTGRDKIM KFEGCYHGHA DSLLVKAGSG ALTLGQPSSP
GVPADFAKHT LTATFNDLGS VRELFAANKG EIACIIVEPV AGNMNCIPPV EGFHEGLREI
CDQEGALLIF DEVMTGFRVA LGGAQAHYNI KPDLTTLGKV IGGGMPVGAF GGRKEVMQYV
APTGPVYQAG TLSGNPVAMA AGFACLNLLK EEGNEKRLAA KTKQLAEGFK VLAEKHGIPM
VVNQVGGMFG FFFTDQETVT CYEDVTKCDV ERFKRFFHLM LKHGVYLAPS AFEASFTSLA
HGSKEIDATL EAADRCFAIL AEEAK