| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03394 |
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| Symbol | truB |
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| ID | 5553322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3432246 |
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| End bp | 3433190 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640908874 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001446568 |
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| Protein GI | 156975661 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTC GTCGTAAAGG TCGTCCAATT AATGGCGTTA TCTTGTTGGA CAAACCAACA
GGTATTTCTT CCAATGATGC ACTGCAAAAA GTAAAACGTA TTTTCTTTGC TGAAAAAGCA
GGTCATACGG GTGCATTGGA CCCACTAGCG ACGGGCATGT TGCCAATCTG CTTAGGCGAA
GCAACTAAGT TCTCTCAGTT CTTGTTGGAT TCAGACAAAC GCTATCGCGT AATCGCAAAG
TTGGGTGAGC GTACTGATAC GTCTGACTCT GATGGCGAAG TGGTAGAGAC GCGTCCAGTT
GACGTGAACC TTGAGAAGTT AGAAGCGTGC ATCGACACGT TCCGTGGTGA ATCAGACCAA
GTACCTTCAA TGTTCTCTGC ATTGAAATAC CAAGGTAAGC CATTGTACGA GTACGCTCGT
AAAGGCATTG AAGTGCCACG TGAATCTCGC AAGATCACCG TATACGAAAT CATACTTCAC
CGCTTTGAAG GTGACGAAGT TGAGATGGAA GTACACTGCT CGAAAGGCAC TTACATCCGT
ACTATCGTTG ATGACCTAGG TGAAATGCTT GGTTGTGGTG CACACGTGAC CATGCTTCGT
CGTACGGGTG TTGCTAAGTA CCCATACGAA AAAATGGTGA CGCTAGAACA ACTTAATGAG
TTACTTGAGC AAGCACATCG CGATGAAGTA GCACCGAAAG AGTTGCTTGA TCCACTGCTG
TTGCCAATGG ACACTGCCGT TGAAGATTTG CCTGAGGTAA ACCTAAAAGC TGAGCTAACC
AACTTAGTAC AACACGGTAT GCCAGTGCAG GTACTGGGTG CGCCAGAGGG TACGCCAATT
CGTATGACTT CTGGTGAAGA TAAGCTGTTT ATTGGCGTTG CTGAAGTGAA CGACGATGGA
AAAGTGGCAC CAAAACGTTT GGTGGTTTTC CGCGACGAAG AGTAA
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| Protein sequence | MARRRKGRPI NGVILLDKPT GISSNDALQK VKRIFFAEKA GHTGALDPLA TGMLPICLGE
ATKFSQFLLD SDKRYRVIAK LGERTDTSDS DGEVVETRPV DVNLEKLEAC IDTFRGESDQ
VPSMFSALKY QGKPLYEYAR KGIEVPRESR KITVYEIILH RFEGDEVEME VHCSKGTYIR
TIVDDLGEML GCGAHVTMLR RTGVAKYPYE KMVTLEQLNE LLEQAHRDEV APKELLDPLL
LPMDTAVEDL PEVNLKAELT NLVQHGMPVQ VLGAPEGTPI RMTSGEDKLF IGVAEVNDDG
KVAPKRLVVF RDEE
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