Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03392 |
Symbol | |
ID | 5553455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3428272 |
End bp | 3429195 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908872 |
Product | lipoprotein NlpI |
Protein accession | YP_001446566 |
Protein GI | 156975659 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATGGT TTCAAACCGC AAGTTTATGT GTTGCTATCG CGCTGACCGG TTGTGCTAAT ACCTCTCAAC AATCGGCACA ACAGTGGATT TACCCTCCGA TGGCGGTACC GCTACAACCA AGCGTGCAAC AAGAAGTTCA GATTGCGCGC CTTTCCCAGC TTTTACAGCG TCCAGACCTG AGTGATGAAG TTCGCGCTAA GATGCATTAC GAGCGTGGTA ACTACTACGA CAGTGTTGGC CTGCGTGATC TTGCTCGTTT GGACTTCAAT CAGTCTCTAC AACTGAATCC AGCTCAACCA GATATCTTTA ACCTACTAGG CGTGTATTTC ACTCAAGTTG GCGAGTTTGA TGCGGCTTAC GAAGCGTTCG ATTCGACATT AGAGCTCGCG CCACAGAATT CATACGCAGA GCGTAACCGT GCAATTGCCC TGTATTACGG CGGTCGTATC GACCTAGCTC TGGAAGACAT GACTAAGCAT TATGAAGAAA TGCCGAGTGA CCCGTTCCGT GCCCTATGGC TTTACATCAT CGAAGCAGAG CAAAACCCTG AGCAAGCGAA AGCGAACCTA GAGAAGCGTT ACCAGCGCGA CCGAAGTGAA GAGTGGGGCT GGGTTTTAGT TGCGATCATG CTGCGTGACG TGTCTGATGA TGCCGCACTA AAAGCTATCA TGGATGGCAC GCGTGAGAAT TACCGCCTTG CTGAGCGTTT AACAGAAACT TACTTCTACC TTGGTAAGCG TTACCAACTC GAGGGTGATA TTGCTGACGC GATCTCGTTG TACAAGCTGG CGATCTCTTT CAACGTTTAT GAATACGTAG AGCACCGTTA CTCTTTCTTG GAGTTGGCCC AAATCTACGA TCAGTTGCAA CAAGAACAAC TTGCTAAGCT CAAAGCCGAG CAAGAGCAAC AAGAAGAAAA ATAA
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Protein sequence | MKWFQTASLC VAIALTGCAN TSQQSAQQWI YPPMAVPLQP SVQQEVQIAR LSQLLQRPDL SDEVRAKMHY ERGNYYDSVG LRDLARLDFN QSLQLNPAQP DIFNLLGVYF TQVGEFDAAY EAFDSTLELA PQNSYAERNR AIALYYGGRI DLALEDMTKH YEEMPSDPFR ALWLYIIEAE QNPEQAKANL EKRYQRDRSE EWGWVLVAIM LRDVSDDAAL KAIMDGTREN YRLAERLTET YFYLGKRYQL EGDIADAISL YKLAISFNVY EYVEHRYSFL ELAQIYDQLQ QEQLAKLKAE QEQQEEK
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