Gene VIBHAR_03388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03388 
Symbol 
ID5553289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3424376 
End bp3425389 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID640908868 
Productprotease 
Protein accessionYP_001446562 
Protein GI156975655 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCT TGTGTCCTGC GGGTAACTTG CCTGCGCTAA AAACCGCGAT TGATTGCGGT 
GCAGACGCCG TATACATCGG CTTTAAAGAC GACACCAACG CTCGTCACTT TGCTGGTCTG 
AACTTCAACG GCAAGAAGCT AGAAAAAGCG GTGCAATACG TTCATGACCG CAACAAAAAG 
ATCCACGTTG CACTTAACAC TTTTGCCCAC CCGAATGGTT TTGAACGTTG GACAAACGCT 
GTCGACAACG CAGCGGCACT GGGTGTCGAT GCACTGATCG TGGCTGACAT TGCGGTACTT 
GAGTACGCTG CTCGCAAATA CCCAGAGCTA GAACTGCACC TTTCTGTACA GGCATCAGCG 
ACCAACGTTG CTGCGGTAGA TTTCTACAAG CAAAACTTCA ACGTCAAACG TGTTGTACTG 
CCTCGTGTAC TGTCTATCCA TCAGGTAAAA CAGCTTTCTC GCAACATCAC CAGCGATGTC 
GAGCTAGAAG TCTTTGCTTT TGGTAGCCTG TGCATCATGT CAGAAGGTCG TTGCTACCTG 
TCTTCGTACA TGACAGGAGA ATCACCAAAC ACGGTTGGTG CGTGCTCTCC GGCGAAATAC 
GTTCGCTGGC AAGAAACAGA AAGTGGTCTG GAATCTCGTC TTAACGACAT CCTGATCGAT 
CGCTACAGCG CTGGTGAAAA CGCGGGCTAC CCAACCTTAT GTAAAGGTCG TTTTGAAGCT 
GAAATTGAAG GCGAGAAAAA ACGCTACCAC GCACTGGAAG AGCCAACCAG TTTGAACACC 
CTTTCTATGT TGCCTGAGCT GTTTGCTGCC AATGTCGCTT CCGTAAAAAT TGAAGGTCGC 
CAACGTAGTC CTGCTTACGT AGAACAAGTA ACGCGCACGT GGCGTGCTGC GATTGATCGT 
TACCAAGCAA ATCCAGAAGC TTACCAAGTA GAAGCGGCTT GGAATGCAGC ATTGGCAAAC 
GTATCGGAAG GCACGCAAAC CACACTTGGT GCTTACCACC GTAAATGGCA GTAG
 
Protein sequence
MELLCPAGNL PALKTAIDCG ADAVYIGFKD DTNARHFAGL NFNGKKLEKA VQYVHDRNKK 
IHVALNTFAH PNGFERWTNA VDNAAALGVD ALIVADIAVL EYAARKYPEL ELHLSVQASA 
TNVAAVDFYK QNFNVKRVVL PRVLSIHQVK QLSRNITSDV ELEVFAFGSL CIMSEGRCYL 
SSYMTGESPN TVGACSPAKY VRWQETESGL ESRLNDILID RYSAGENAGY PTLCKGRFEA 
EIEGEKKRYH ALEEPTSLNT LSMLPELFAA NVASVKIEGR QRSPAYVEQV TRTWRAAIDR 
YQANPEAYQV EAAWNAALAN VSEGTQTTLG AYHRKWQ