Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03388 |
Symbol | |
ID | 5553289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3424376 |
End bp | 3425389 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640908868 |
Product | protease |
Protein accession | YP_001446562 |
Protein GI | 156975655 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCT TGTGTCCTGC GGGTAACTTG CCTGCGCTAA AAACCGCGAT TGATTGCGGT GCAGACGCCG TATACATCGG CTTTAAAGAC GACACCAACG CTCGTCACTT TGCTGGTCTG AACTTCAACG GCAAGAAGCT AGAAAAAGCG GTGCAATACG TTCATGACCG CAACAAAAAG ATCCACGTTG CACTTAACAC TTTTGCCCAC CCGAATGGTT TTGAACGTTG GACAAACGCT GTCGACAACG CAGCGGCACT GGGTGTCGAT GCACTGATCG TGGCTGACAT TGCGGTACTT GAGTACGCTG CTCGCAAATA CCCAGAGCTA GAACTGCACC TTTCTGTACA GGCATCAGCG ACCAACGTTG CTGCGGTAGA TTTCTACAAG CAAAACTTCA ACGTCAAACG TGTTGTACTG CCTCGTGTAC TGTCTATCCA TCAGGTAAAA CAGCTTTCTC GCAACATCAC CAGCGATGTC GAGCTAGAAG TCTTTGCTTT TGGTAGCCTG TGCATCATGT CAGAAGGTCG TTGCTACCTG TCTTCGTACA TGACAGGAGA ATCACCAAAC ACGGTTGGTG CGTGCTCTCC GGCGAAATAC GTTCGCTGGC AAGAAACAGA AAGTGGTCTG GAATCTCGTC TTAACGACAT CCTGATCGAT CGCTACAGCG CTGGTGAAAA CGCGGGCTAC CCAACCTTAT GTAAAGGTCG TTTTGAAGCT GAAATTGAAG GCGAGAAAAA ACGCTACCAC GCACTGGAAG AGCCAACCAG TTTGAACACC CTTTCTATGT TGCCTGAGCT GTTTGCTGCC AATGTCGCTT CCGTAAAAAT TGAAGGTCGC CAACGTAGTC CTGCTTACGT AGAACAAGTA ACGCGCACGT GGCGTGCTGC GATTGATCGT TACCAAGCAA ATCCAGAAGC TTACCAAGTA GAAGCGGCTT GGAATGCAGC ATTGGCAAAC GTATCGGAAG GCACGCAAAC CACACTTGGT GCTTACCACC GTAAATGGCA GTAG
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Protein sequence | MELLCPAGNL PALKTAIDCG ADAVYIGFKD DTNARHFAGL NFNGKKLEKA VQYVHDRNKK IHVALNTFAH PNGFERWTNA VDNAAALGVD ALIVADIAVL EYAARKYPEL ELHLSVQASA TNVAAVDFYK QNFNVKRVVL PRVLSIHQVK QLSRNITSDV ELEVFAFGSL CIMSEGRCYL SSYMTGESPN TVGACSPAKY VRWQETESGL ESRLNDILID RYSAGENAGY PTLCKGRFEA EIEGEKKRYH ALEEPTSLNT LSMLPELFAA NVASVKIEGR QRSPAYVEQV TRTWRAAIDR YQANPEAYQV EAAWNAALAN VSEGTQTTLG AYHRKWQ
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