| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03387 |
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| Symbol | |
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| ID | 5553144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 3422187 |
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| End bp | 3424226 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640908867 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446561 |
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| Protein GI | 156975654 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCC AGCAATTACA ACATTGGTTT GCAACGCTTA CCTCAAATAG CCCATTCTTT
TTTGCCATTC TTGACAATAA ACACAATTAT CGAATGGTGA GTGATCGCTA TTGTGACATT
GCAGGCTTAA GACACGACGA CATCGTTGGT CTAAACGACA GCCAAGTACT GGGAGAGCAG
TTCTACAAAA AGCTCACGCC CTACTACAAA CGCGCGTTCA AAGGCGATCA TGTTGAAGCA
GAAATCACGC TAGACGAGAC CGACCTTGAA ACCAGCCTTC ACTTCAGTCT TTCTCCGGTT
CATGAAGAAA ACGAAATCCG CTTCGTGGTT TTCCATGCCA TAGATACGTC TGAAAAACAA
ATTCTGGTTC GCTCGTTAGA AGAGTCAGAA AGCAAATTCG CCAAGTTAAC TCAACTCCTA
CCTGACGGTT TGTTATTGGT GGAAGATGAC ATCATCATTT CTGCCAACCC AGCCTCCGCA
CGTTTACTCG GGTTGAATTC ACCACATGAG CTACTTGGTG AAGAGCTGAC TCGGCTATTT
ATCGATGAAA ACAGCAAAAA AGTCTTCACC CATCGCATCA GTACTCTGCT TTCTGAAAAA
CCTTTTGTGT GCCTGACTAG CGCGCGTTGT GGGTTCGAAC GAAAAGTACA GTTGCATGCC
GATACCACGG CGATTCTCGG TAGTGAGTCT CAAATCATTT TGATTCAAGA CGCCGATGAC
GCACCAAAGC TGCTCTCTTC CAACTCCAAC GAAGACGCGC ACATCGATTC GCTGACCAAG
CTGTATAACC GCTTTGGCTT TACCAAGCGA CTAGAACAAC TCATCAAGAG TCAGACACCG
CTGCTGGTTT TCTACCTCGA TATCGATAAC TTTAAGAACA TTAACGACTC ACTAGGCCAT
CACATCGGTG ACAAAGTGAT TCAAGAAGTC TCCGCCCGCC TAAAACGTTC TTTGCCTAAT
CAAGCCATCA TTGGTCACTT GGGTGGCGAC GAATTTGGCA TTATCCTGCC TGAGCCAGAA
AACACTCGCA TGGCGGAGAT CCTCTCTGAG CGCATTATTT CTCTGATTAA CCAACCTTTC
GATCTGCATC ATTTCAGTAA ACGCCTTGCG TGTTCTATCG GTAGCGTGCG TTACCCAGAA
GACGGGCAAG ACGCGCGCAT TCTGCTGCAA AACGCTGACA CCGCGATGTA CGAAGCAAAA
GACCGTGGTC GGAACCGCCT GATTAAATTT AACGATCAGA TGAACAAAGA AGCGCGTATG
CGTTTGTGGT TAGAGATCGA GCTACAAAAA GCGTTGCAGC AAAACGGCTT GGAAGTATGG
TACCAACCAA AAGTTAACGC CCGCGACTTC AGCATTAACG GAGCCGAAGC GCTAGTACGT
TGGAAGCACC CGGTCGAAGG TTACATTAGC CCGGGGGCAT TTATCCCTGT AGCTGAGCGT
GCAGGCTTGA TTGAACACCT TGGTCGCGTG GTAATGCGTG ATGTGTTTAA CACAGTAAAA
CGCTGGAAAC TGCAAGGCAT TCTACCGGGA CGCGTAGCGA TCAACCTCTC TCCAGAACAG
TTTGGCAACC CACAGCTGAT CGACTACATG GAGAAGCTAC TGCGCACCAC CGAACTTGAC
CCAAGCTGCA TTACCTTCGA GCTAACAGAA AGTGCGGTAA TGAGCGACAG CGAACACACG
CTGCAAATGC TCAATGCGAT CAAGAAGCTT GGTTTCGCAT TGTCTATCGA TGACTTCGGT
ACTGGTTACT CTTCCCTTTC CTACTTAGCA CGCTTCCCTA TCGATGAGCT AAAAATCGAC
CGCGCGTTTA TCAACGATAT CGATACGCTC CCGAAACAGG TAACAGTGAT TGAGAACATC
ATCAACCTTG GTAAATCATT GGATTTGACC GTGGTCGCCG AAGGTGTGGA AACCCACCAA
CAAGCGACAC TGCTATCGAA CCTGCAATGT AACTCGATTC AAGGCTTCCA TTTTTACCGT
CCTCAACCTA AACACGAGGT TGAAGAGTTG TTTGCGCAAA ACCGCCGTCA TAAGAACTGA
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| Protein sequence | MPSQQLQHWF ATLTSNSPFF FAILDNKHNY RMVSDRYCDI AGLRHDDIVG LNDSQVLGEQ
FYKKLTPYYK RAFKGDHVEA EITLDETDLE TSLHFSLSPV HEENEIRFVV FHAIDTSEKQ
ILVRSLEESE SKFAKLTQLL PDGLLLVEDD IIISANPASA RLLGLNSPHE LLGEELTRLF
IDENSKKVFT HRISTLLSEK PFVCLTSARC GFERKVQLHA DTTAILGSES QIILIQDADD
APKLLSSNSN EDAHIDSLTK LYNRFGFTKR LEQLIKSQTP LLVFYLDIDN FKNINDSLGH
HIGDKVIQEV SARLKRSLPN QAIIGHLGGD EFGIILPEPE NTRMAEILSE RIISLINQPF
DLHHFSKRLA CSIGSVRYPE DGQDARILLQ NADTAMYEAK DRGRNRLIKF NDQMNKEARM
RLWLEIELQK ALQQNGLEVW YQPKVNARDF SINGAEALVR WKHPVEGYIS PGAFIPVAER
AGLIEHLGRV VMRDVFNTVK RWKLQGILPG RVAINLSPEQ FGNPQLIDYM EKLLRTTELD
PSCITFELTE SAVMSDSEHT LQMLNAIKKL GFALSIDDFG TGYSSLSYLA RFPIDELKID
RAFINDIDTL PKQVTVIENI INLGKSLDLT VVAEGVETHQ QATLLSNLQC NSIQGFHFYR
PQPKHEVEEL FAQNRRHKN
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