| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03370 |
|---|
| Symbol | |
|---|
| ID | 5555983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3404365 |
|---|
| End bp | 3405744 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640908850 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_001446544 |
|---|
| Protein GI | 156975637 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAG CAAAACGAGC GTATGTTTGT AATGATTGTG GCGCGGATTT CCCACGTTGG
CAGGGGCAGT GTAATGCGTG TGGTGCATGG AACACGATTA CTGAAGTTCG TATTGCTGCA
TCGCCAACGG TAGCACGCAA CGAACGCTTA TCTGGTTACG CAGGCTCAGC AACGGAATCA
AAAGTTCAAA CTCTGTCGGA GATTGATCTG CAAGAAGTGC CCCGTTTTAC GAGTGGTTTT
AAAGAGCTAG ACCGAGTGCT TGGTGGTGGT GTGGTTCCGG GCGCTGCTAT TCTTATCGGT
GGTAACCCCG GCGCAGGTAA GTCGACTTTG CTTTTGCAAA CCATGTGTCT GTTGTCTTCG
CAAATGCCTA CTCTCTATGT GACGGGTGAA GAATCGCTCC AGCAAGTGGC AATGCGTGCC
GCACGACTTG GGTTGCCAAA AGAGCACCTG AAGATGTTGT CGGAAACGAA CGTCGACAAG
ATTTGCCAAA TTGCAGAGAA AGAACAGCCG CGCATTATGG TGATTGACTC GATTCAGGTA
ATGCACGTGT CTGACGTTCA GTCCTCGCCA GGTAGTGTCG CGCAGGTACG TGAATCGGCA
ACCGCGCTGA CGCGTTATGC AAAGCAAAAT AATGTGGCTG TCTTTATTGT TGGTCACGTA
ACAAAAGATG GTACCCTTGC CGGCCCTAAA GTACTTGAAC ACATTATTGA CTGTTCAGTT
CTACTCGATG GTGGCACTGA TAGTCGCTTC CGAACCTTAC GTAGCCACAA AAACCGTTTT
GGTGCGGTGA ATGAACTTGG CGTCTTTGCC ATGACGGGGC AGGGACTGAA AGAGGTCAAT
AACCCTTCGG CGATTTTCCT TTCCCGCGGT GAAGAAGAGA CGTCGGGTTC GTCCGTTATG
GTGGTGTGGG AAGGTACGCG CCCTCTATTA GTAGAGATTC AAGCACTGGT GGACTACTCA
CAATTGGCAA ACCCACGTCG CGTCGCGGTG GGCCTAGAAC AAAACCGTCT GTCTTTATTA
TTGGCGGTGC TGCATAAGCA CGGTGGCCTA CAAATGGCCG ATCAAGATGT GTTTGTGAAT
GTCGTTGGTG GTGTAAAAGT CACAGAGACC AGTGCTGACC TTGCGCTAGT TATGGCGCTT
TTGTCGAGTT TTCGCGATCG TCCACTACCA AAAGATGTGG TGGTGTTTGG TGAGGTTGGC
CTAGCGGGAG AGATTCGCCC AGTGCCGAGT GGCCAAGAGC GTTTGAATGA AGCATTCAAG
CACGGCTTTA AGAAAGCGAT CGTACCAGCA GCGAATATGC CAAAGGGCGG TATTCCTGGT
ATGCAAATCC ATGGCGTTAA AAAACTGTCG GAGGCTATCG AAGCATTTGA TGAGTTGTAA
|
|---|
| Protein sequence | MAKAKRAYVC NDCGADFPRW QGQCNACGAW NTITEVRIAA SPTVARNERL SGYAGSATES
KVQTLSEIDL QEVPRFTSGF KELDRVLGGG VVPGAAILIG GNPGAGKSTL LLQTMCLLSS
QMPTLYVTGE ESLQQVAMRA ARLGLPKEHL KMLSETNVDK ICQIAEKEQP RIMVIDSIQV
MHVSDVQSSP GSVAQVRESA TALTRYAKQN NVAVFIVGHV TKDGTLAGPK VLEHIIDCSV
LLDGGTDSRF RTLRSHKNRF GAVNELGVFA MTGQGLKEVN NPSAIFLSRG EEETSGSSVM
VVWEGTRPLL VEIQALVDYS QLANPRRVAV GLEQNRLSLL LAVLHKHGGL QMADQDVFVN
VVGGVKVTET SADLALVMAL LSSFRDRPLP KDVVVFGEVG LAGEIRPVPS GQERLNEAFK
HGFKKAIVPA ANMPKGGIPG MQIHGVKKLS EAIEAFDEL
|
|---|
| |