Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03370 |
Symbol | |
ID | 5555983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3404365 |
End bp | 3405744 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640908850 |
Product | DNA repair protein RadA |
Protein accession | YP_001446544 |
Protein GI | 156975637 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAG CAAAACGAGC GTATGTTTGT AATGATTGTG GCGCGGATTT CCCACGTTGG CAGGGGCAGT GTAATGCGTG TGGTGCATGG AACACGATTA CTGAAGTTCG TATTGCTGCA TCGCCAACGG TAGCACGCAA CGAACGCTTA TCTGGTTACG CAGGCTCAGC AACGGAATCA AAAGTTCAAA CTCTGTCGGA GATTGATCTG CAAGAAGTGC CCCGTTTTAC GAGTGGTTTT AAAGAGCTAG ACCGAGTGCT TGGTGGTGGT GTGGTTCCGG GCGCTGCTAT TCTTATCGGT GGTAACCCCG GCGCAGGTAA GTCGACTTTG CTTTTGCAAA CCATGTGTCT GTTGTCTTCG CAAATGCCTA CTCTCTATGT GACGGGTGAA GAATCGCTCC AGCAAGTGGC AATGCGTGCC GCACGACTTG GGTTGCCAAA AGAGCACCTG AAGATGTTGT CGGAAACGAA CGTCGACAAG ATTTGCCAAA TTGCAGAGAA AGAACAGCCG CGCATTATGG TGATTGACTC GATTCAGGTA ATGCACGTGT CTGACGTTCA GTCCTCGCCA GGTAGTGTCG CGCAGGTACG TGAATCGGCA ACCGCGCTGA CGCGTTATGC AAAGCAAAAT AATGTGGCTG TCTTTATTGT TGGTCACGTA ACAAAAGATG GTACCCTTGC CGGCCCTAAA GTACTTGAAC ACATTATTGA CTGTTCAGTT CTACTCGATG GTGGCACTGA TAGTCGCTTC CGAACCTTAC GTAGCCACAA AAACCGTTTT GGTGCGGTGA ATGAACTTGG CGTCTTTGCC ATGACGGGGC AGGGACTGAA AGAGGTCAAT AACCCTTCGG CGATTTTCCT TTCCCGCGGT GAAGAAGAGA CGTCGGGTTC GTCCGTTATG GTGGTGTGGG AAGGTACGCG CCCTCTATTA GTAGAGATTC AAGCACTGGT GGACTACTCA CAATTGGCAA ACCCACGTCG CGTCGCGGTG GGCCTAGAAC AAAACCGTCT GTCTTTATTA TTGGCGGTGC TGCATAAGCA CGGTGGCCTA CAAATGGCCG ATCAAGATGT GTTTGTGAAT GTCGTTGGTG GTGTAAAAGT CACAGAGACC AGTGCTGACC TTGCGCTAGT TATGGCGCTT TTGTCGAGTT TTCGCGATCG TCCACTACCA AAAGATGTGG TGGTGTTTGG TGAGGTTGGC CTAGCGGGAG AGATTCGCCC AGTGCCGAGT GGCCAAGAGC GTTTGAATGA AGCATTCAAG CACGGCTTTA AGAAAGCGAT CGTACCAGCA GCGAATATGC CAAAGGGCGG TATTCCTGGT ATGCAAATCC ATGGCGTTAA AAAACTGTCG GAGGCTATCG AAGCATTTGA TGAGTTGTAA
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Protein sequence | MAKAKRAYVC NDCGADFPRW QGQCNACGAW NTITEVRIAA SPTVARNERL SGYAGSATES KVQTLSEIDL QEVPRFTSGF KELDRVLGGG VVPGAAILIG GNPGAGKSTL LLQTMCLLSS QMPTLYVTGE ESLQQVAMRA ARLGLPKEHL KMLSETNVDK ICQIAEKEQP RIMVIDSIQV MHVSDVQSSP GSVAQVRESA TALTRYAKQN NVAVFIVGHV TKDGTLAGPK VLEHIIDCSV LLDGGTDSRF RTLRSHKNRF GAVNELGVFA MTGQGLKEVN NPSAIFLSRG EEETSGSSVM VVWEGTRPLL VEIQALVDYS QLANPRRVAV GLEQNRLSLL LAVLHKHGGL QMADQDVFVN VVGGVKVTET SADLALVMAL LSSFRDRPLP KDVVVFGEVG LAGEIRPVPS GQERLNEAFK HGFKKAIVPA ANMPKGGIPG MQIHGVKKLS EAIEAFDEL
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