| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03367 |
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| Symbol | |
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| ID | 5556211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 3398670 |
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| End bp | 3401060 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640908847 |
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| Product | P pilus assembly protein, porin PapC |
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| Protein accession | YP_001446541 |
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| Protein GI | 156975634 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC TCATTTTACA CTTTATTCTA GTTTTCACTG TAAAAGCTGC ATTAGCTCAT
AGCTGGTCGT TCCCATTCCC TGTCATTTGG GGTGAAAATA CTATCGGCCA AGTGAGCGCG
TACTCAGACG GTATGACCGT AGATTCAATC AACGTTGAAC AGCTCGCTCA GTCAGTAGAG
AAACTGATAA ATGATGAAAC TCTCGTGGCA TTGAGAGGAT TCTCTGAAAA ATATATCACG
GTTGAACAAT TGACTCGTAT TGGAATCAAC GCAAATTTCG ACACATCCGA ACAAAGTATT
AATCTAGTCA TAGATGAGTC TGCAGCCGCG GACTTTTTAC TCTCCTTCGG AAGCAAATAC
GAGCCTGCAC AGTACTCGGA AAGCGCATTC TGGACGATAC AAAATACACT GAACGCCAGT
ACTGATTACA CCTTATTTAG CGATTCTAAC GCCAAAGACA CGCAAACTTG GCTAGGGGAA
TGGTTAGTTC GAGCCAATAT TGGTGGCGTT CGAGGGGTAA ACCTTGATGT CTCCGGCTTC
GTCACTGGCG GTAATAATGT CGATTCCGAT GTCTATCGTG GTGAAGCTCG TCTTTTTTTC
GATGAACCCA GCACACCTTG GCGCTTCACC TTTGGGGATG TGACCCAAAC TAGTGCTGGC
CATCTGCCGA GCACGCCTCT GGGCGGAGTC GCTTTTGAAC GTTTGTACCA AGATTTACAG
CCCACCAGAA ACATTCAGAA CGGCGGGACG CAACCTCTAG TATTAAATGA AAGCGCCGAT
GTCGAAATCT ACATTAACGA TATCTTCCTC ACCGAGATTA GATTGCCACC GGGCCGATAT
ACACTGGATG ATCTACCTCT CGTGTCAGGT ACCAATGATG TGCGGTTAGA CATTAGCTAT
CAATCAGGCC GCACCGACAC CATCGTTTAC AGTCAATTTT TTAACTCTCG TTTACTGCGT
GAAGGCATTT CTGACTTCGG TTTTTACTCT GGGTTAATCT CGACGATCGA GGATAACAAC
TTTAAATACG ACGATGAACA GTGGGTCACG TCGGGATACT ACGACTTCGG TATCAGCGAC
ACATTAACGC TGGGTGTAAA CGGACTTTAC CATCCTAAGG GCCAACAACT TGGCGTTATT
GCCACTATCG GTTCTGATTG GGGGAATGTA GGTGTTCGAG CATCTGCGCA AAACAATAAA
CCTAATGATG ACACTGGCAG TATCTACAGC CTCGATTATT CCCATCAAGT GTGGGGAACG
GATAGCTATG GCTCTCCAAA CTTTCGTCTC GGCGTCGAAT ACCAAGATAA GTACTTCGCA
TTACCTTGGC AAATAGCCGA ACCAAGAACA GGCTTACGCG TATTCTCTAA CTACGTGCTC
ACCATTACAG ATGACCTTAG TCTAATATTA AGTGGAGACT ATCGTGACTT CGAAGAGGAA
GAGGTTGAAT GGCTTGCGTC ATCTGAAGTC GCTTGGCAAT TTTACAGCCT GTCACTCTCT
GCTGGTGTAG AGAAAGAGGA GAATCCAAAC GATAACATTG ACGAGACGCG CTTCACTTTC
TCTGCAGACT GGGACTGGAA CTCTGTGTCT GGGGAATACA ATGCAAACGT CTCTTACTCC
AACGAGCCCG ATACTTACAG AGCTCAATTT CAACGCCCTT CCGATGATTA CACAGGCAGC
TATGGCTATG CGCTTACAGC AGAAGGTGAT GCCGACTCTC AAACTTATTC TGTAGAGGGC
AATTATGTGG CAAACCGCTT CATCACTGAT GCTAAAGTCT CTCACCTCGA CTTTGACAAT
TCCGACAGTT ACCAAACCGC TTCATTGCGA GCAAGTACGG CGCTGACGCT GGCTGATGGC
AACTTAGCTT GGTCACGTCC TATCAATGGA CCTGTTGCCA TCGTCGCCGT TCATGACTCT
TTGGATGCTG ATGTTGAAAT CAACGCCGTT GCCGACGACC CAGCTGAAGC GATTTCAACT
TCGGCGATAA ATAATGCCGT TCAACTATCT GGTGGGCATC AGTTGTCTAG TGTCTACATC
AATGTCCCAG ATGCTCCTGT CGGCTATGAC TTTGGTGACC ACGAATACAA CATCACACCA
GGGTCACAAA CTGGCCATCT AATAAACATC GGCTCAATCG CGTCAAAGAC CATAATTGGC
ACACTCGAAA TCAGTTCTAA AAAACCACTA AAGCTCTACC AAGGGCAGTT AGTTGGACAA
CAGAAAACCT ATGACTTTTT CACCAATCGA TCAGGTCGAT TTGTTGTAGA AGGTATTGCT
CCGGGCACCT ACACCATCAC GGTTGAAGGA TTCAGCCCAA CAAAACTAAA CGTACCAGAA
ACCAATGAAA ATCTGATTTA TCTACCCACT TTACTTATTA AAGAGGGATA A
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| Protein sequence | MKNLILHFIL VFTVKAALAH SWSFPFPVIW GENTIGQVSA YSDGMTVDSI NVEQLAQSVE
KLINDETLVA LRGFSEKYIT VEQLTRIGIN ANFDTSEQSI NLVIDESAAA DFLLSFGSKY
EPAQYSESAF WTIQNTLNAS TDYTLFSDSN AKDTQTWLGE WLVRANIGGV RGVNLDVSGF
VTGGNNVDSD VYRGEARLFF DEPSTPWRFT FGDVTQTSAG HLPSTPLGGV AFERLYQDLQ
PTRNIQNGGT QPLVLNESAD VEIYINDIFL TEIRLPPGRY TLDDLPLVSG TNDVRLDISY
QSGRTDTIVY SQFFNSRLLR EGISDFGFYS GLISTIEDNN FKYDDEQWVT SGYYDFGISD
TLTLGVNGLY HPKGQQLGVI ATIGSDWGNV GVRASAQNNK PNDDTGSIYS LDYSHQVWGT
DSYGSPNFRL GVEYQDKYFA LPWQIAEPRT GLRVFSNYVL TITDDLSLIL SGDYRDFEEE
EVEWLASSEV AWQFYSLSLS AGVEKEENPN DNIDETRFTF SADWDWNSVS GEYNANVSYS
NEPDTYRAQF QRPSDDYTGS YGYALTAEGD ADSQTYSVEG NYVANRFITD AKVSHLDFDN
SDSYQTASLR ASTALTLADG NLAWSRPING PVAIVAVHDS LDADVEINAV ADDPAEAIST
SAINNAVQLS GGHQLSSVYI NVPDAPVGYD FGDHEYNITP GSQTGHLINI GSIASKTIIG
TLEISSKKPL KLYQGQLVGQ QKTYDFFTNR SGRFVVEGIA PGTYTITVEG FSPTKLNVPE
TNENLIYLPT LLIKEG
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