Gene VIBHAR_03343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03343 
Symbol 
ID5553291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3379064 
End bp3380572 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content44% 
IMG OID640908823 
ProductFlp pilus assembly protein TadG 
Protein accessionYP_001446517 
Protein GI156975610 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCA CTATTAAGCA ACGAGCTCCA ATTCATTCTG GTCGTAGTCA AAAAGGGATT 
GCGGCAGTTT GGTTCGCACT GAGTTTAGTG CCTGTTTTTG GTATGACATT TTTCGCCGTA
GAGGGGACGC GTTATATCCA AGAGACAAGT CGACTGAGAG ACGCAGCGCA AACTGCTGCA
TTGGCCATTA CGATAGACGA CAAGTCGAAC CAAGCGGATG CATTGGCGAC GATGTACATC
AATGACTATG TGCGTGATAT TTCCCATGTT GATATTCAAA CGGTTAGGAC GTACGAAGAG
CCAACAGAAG ACAACGATAA TACGGAAAAA ATCCAATATT CCGTGCAAGC GGTTACCACT
CACAACTCGT GGTTTGCCAG TAACTCAATC CCTTCCTTTG AGACTCAGGA GAAACTCGCT
GGACAAGCCG TTGCAGCGAA ATATCCTTTT TATTTAGGAG ACAAAATCAT TGATCTGGTT
TTGGTGACTG ACTTTTCCGG GTCGATGAAC AACAGCTGGG ATGGCGAAAT TAAAATTGAT
CTCCTCAAGG ATGCGGTTAA GCAAATTTCA AATCGTATCT TAGTTCCGCG AGAAGGCGAG
AGTGAGGTAC TGAATCGTAT TGCCATTATT CCATTTAACC TGCGAGTACA AGAGAAGATA
AATGACAATC TCTATTCTAC CAGTCAGTTA AGGTACAAAG GTAACTACCG CAAAAGCGTC
TCTTCAGTGA AGTATGAGCA GGTAAATTGG GACTATTGGT CTCCTTACTC TGAAGAAGCT
GTGGAGGAAT GTGCCAACAA ACGCACCGAC TGCCCAAACA AAAAAAGTTG GGAGCGGGAC
CAAGCGAAGC GAGTCGCAGA TGTGGTGAAT ATCAACAATA ACCGTTTGGA GATCCCTGAC
TATGTCGGTT ACTCAAAATC GGTTAGACAC ATGTTTGACG ATAAAGTCGC GAATAACAAT
TTGACCTTTC ATTTTAGATC GAACAACAAC AAGCTTTATA ACTCCAGTAT GACGCGGACT
GGTAATTCGG GCTTTTATAC CATTCCATTG ACTGCCAATA AAGCAAACCT CGACAAGATG
CAAACCATGA GCTCTGGTGG GAACACGGCT GCCCATCAAG GTATGTTGCG TGGATTGCAA
ATCATGGAAG CAGGTCGGCC GAACGGTGGA AGCGAGGAAG AAACGGAGCA ATACAATGAC
CGTCTAAAAA TGCTGATAGT AATCAGTGAC GGTATGGAGT ACCCATACAC GGAAATCTTG
CCCGGTTTAG TAAACAAAGG AATGTGCGAT AAAGCGCGTG AGCACTTCCA AACCGAGAAC
GGTAATTTGT ACATTGGCGT CATTGGCGTG AACTTCAGTG CATCTTCGCA AAGCGGTTTC
CAAGATTGTG TGTTGAATCC GGATGAAGAC ATCATCGATG TAACAGAGAC GGAAGACTTC
ATTAAGAAAA TCGAAGAACT AATTCAGAAA GGATCTGGTG GTAATGGTGT ATCGAGACTA
TATGGGTGA
 
Protein sequence
MNFTIKQRAP IHSGRSQKGI AAVWFALSLV PVFGMTFFAV EGTRYIQETS RLRDAAQTAA 
LAITIDDKSN QADALATMYI NDYVRDISHV DIQTVRTYEE PTEDNDNTEK IQYSVQAVTT
HNSWFASNSI PSFETQEKLA GQAVAAKYPF YLGDKIIDLV LVTDFSGSMN NSWDGEIKID
LLKDAVKQIS NRILVPREGE SEVLNRIAII PFNLRVQEKI NDNLYSTSQL RYKGNYRKSV
SSVKYEQVNW DYWSPYSEEA VEECANKRTD CPNKKSWERD QAKRVADVVN INNNRLEIPD
YVGYSKSVRH MFDDKVANNN LTFHFRSNNN KLYNSSMTRT GNSGFYTIPL TANKANLDKM
QTMSSGGNTA AHQGMLRGLQ IMEAGRPNGG SEEETEQYND RLKMLIVISD GMEYPYTEIL
PGLVNKGMCD KAREHFQTEN GNLYIGVIGV NFSASSQSGF QDCVLNPDED IIDVTETEDF
IKKIEELIQK GSGGNGVSRL YG