Gene VIBHAR_03340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03340 
Symbol 
ID5552890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3376043 
End bp3376984 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content48% 
IMG OID640908820 
Producttranscriptional regulator 
Protein accessionYP_001446514 
Protein GI156975607 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGG ATGAGGTTTG TTCTGTGAAA GATGACATCC AGTGGCGCAA TATCGATTTG 
AATCTGTTGG TGACCTTTTC TTACCTATAT CGCTATCGCA GTGTGAGTTT GGCGGCCGAG
AAAAGCTTTG TCAGTCAGTC TGCTATGAGC CACAGCTTGT CGCGTTTGCG TGTGTTGTTT
GATGACCCAT TGTTTGAGCG TAAAGGCCAT AAGATGGACC CAACCGAGCA CGCGCATCAT
ATTGCGCCGA CGGTGCATCA TTTATTGGAC TCGATTGCCA AAGACTTACT GACGAAGTCC
GCTTTCCGAC CAGAAAACTA CGCCGGTGTG TGCCGCATTG GTTTAACCGA CTACGCCGAA
TTCATCTTCG CCCCACTGCT TTATGATGAA ATCCGTAAGC GTGCGCCTGA AGCCCAAATC
AGTTTTATTA ACGTCAACCG TAGCAATTAC GTGGCGATCA CGGAACACGA TAAGTTAGAT
GTCATCATCG GCAGTATGCC AGTACTCGAC GATAACTTTG AGAGCCAGTA CCTCTACACA
GAAAAGCACA TATGTCTGTG TGATAAGCGA GTGTTGAAAG GTGAAACACA ATTGTCGATT
CATGCTTTTG CCAATATCGA GCAAGCCCTC GTGAGCCCTG ATGGCAGCTT GAGTACACAA
GTAGACAAAA AGCTTGCTGA GCACGGCTTG AGCCGAAAAG TCACCGTTGC TTCACGTAAC
TTCCTGACAA TTCGAAACTT GCTTAAACAG CGTGAGTTGG TTGCGATTGT GCCGGAGAAA
ATGGCGCAAG CGGAAGGGTT CTCGGACGAT TTGGTGAGCG TCCAGCCGCC GATTGCGGTA
GCGGATTTTG ATATCGCGAT GTTGTGGCAT ACCAGCCGTA ACAACGAGGA TAAAGGGATT
TGGCTGCGTC AGCTGGTAGC AGAATTGGTT TCAGGTAATT GA
 
Protein sequence
MKWDEVCSVK DDIQWRNIDL NLLVTFSYLY RYRSVSLAAE KSFVSQSAMS HSLSRLRVLF 
DDPLFERKGH KMDPTEHAHH IAPTVHHLLD SIAKDLLTKS AFRPENYAGV CRIGLTDYAE
FIFAPLLYDE IRKRAPEAQI SFINVNRSNY VAITEHDKLD VIIGSMPVLD DNFESQYLYT
EKHICLCDKR VLKGETQLSI HAFANIEQAL VSPDGSLSTQ VDKKLAEHGL SRKVTVASRN
FLTIRNLLKQ RELVAIVPEK MAQAEGFSDD LVSVQPPIAV ADFDIAMLWH TSRNNEDKGI
WLRQLVAELV SGN