Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03340 |
Symbol | |
ID | 5552890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3376043 |
End bp | 3376984 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908820 |
Product | transcriptional regulator |
Protein accession | YP_001446514 |
Protein GI | 156975607 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATGGG ATGAGGTTTG TTCTGTGAAA GATGACATCC AGTGGCGCAA TATCGATTTG AATCTGTTGG TGACCTTTTC TTACCTATAT CGCTATCGCA GTGTGAGTTT GGCGGCCGAG AAAAGCTTTG TCAGTCAGTC TGCTATGAGC CACAGCTTGT CGCGTTTGCG TGTGTTGTTT GATGACCCAT TGTTTGAGCG TAAAGGCCAT AAGATGGACC CAACCGAGCA CGCGCATCAT ATTGCGCCGA CGGTGCATCA TTTATTGGAC TCGATTGCCA AAGACTTACT GACGAAGTCC GCTTTCCGAC CAGAAAACTA CGCCGGTGTG TGCCGCATTG GTTTAACCGA CTACGCCGAA TTCATCTTCG CCCCACTGCT TTATGATGAA ATCCGTAAGC GTGCGCCTGA AGCCCAAATC AGTTTTATTA ACGTCAACCG TAGCAATTAC GTGGCGATCA CGGAACACGA TAAGTTAGAT GTCATCATCG GCAGTATGCC AGTACTCGAC GATAACTTTG AGAGCCAGTA CCTCTACACA GAAAAGCACA TATGTCTGTG TGATAAGCGA GTGTTGAAAG GTGAAACACA ATTGTCGATT CATGCTTTTG CCAATATCGA GCAAGCCCTC GTGAGCCCTG ATGGCAGCTT GAGTACACAA GTAGACAAAA AGCTTGCTGA GCACGGCTTG AGCCGAAAAG TCACCGTTGC TTCACGTAAC TTCCTGACAA TTCGAAACTT GCTTAAACAG CGTGAGTTGG TTGCGATTGT GCCGGAGAAA ATGGCGCAAG CGGAAGGGTT CTCGGACGAT TTGGTGAGCG TCCAGCCGCC GATTGCGGTA GCGGATTTTG ATATCGCGAT GTTGTGGCAT ACCAGCCGTA ACAACGAGGA TAAAGGGATT TGGCTGCGTC AGCTGGTAGC AGAATTGGTT TCAGGTAATT GA
|
Protein sequence | MKWDEVCSVK DDIQWRNIDL NLLVTFSYLY RYRSVSLAAE KSFVSQSAMS HSLSRLRVLF DDPLFERKGH KMDPTEHAHH IAPTVHHLLD SIAKDLLTKS AFRPENYAGV CRIGLTDYAE FIFAPLLYDE IRKRAPEAQI SFINVNRSNY VAITEHDKLD VIIGSMPVLD DNFESQYLYT EKHICLCDKR VLKGETQLSI HAFANIEQAL VSPDGSLSTQ VDKKLAEHGL SRKVTVASRN FLTIRNLLKQ RELVAIVPEK MAQAEGFSDD LVSVQPPIAV ADFDIAMLWH TSRNNEDKGI WLRQLVAELV SGN
|
| |