Gene VIBHAR_03334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03334 
Symbol 
ID5553213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3369465 
End bp3370451 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content47% 
IMG OID640908815 
ProductDNA-binding transcriptional repressor EbgR 
Protein accessionYP_001446509 
Protein GI156975602 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAC TAAAAGATAT CGCTACAGAA GCGGGCGTCT CACTTGCAAC CGTCTCACGC 
GTGTTGAATG ACGATCCGAC TCTGAGCGTA AAAGAAGAAA CTAAACACCG CATCTTAGAG
ATTGCTGAAA AGCTGGAATA CCGCACTAGC AGTTCGAAAA AAGCCACCAA AGAGGCGAAA
CAAAAACACC ACTTTTTAGC TTTGTATAAC TACAAGCAAG AAGCAGAGGT GAATGACCCC
TACTACCTGT CGATTCGTCA CGGAATTGAA ACCCAGTGCG ATAGATTGGG CATTACATTA
ACCAACTGCT ACGACAGCGT CATCGATGTC GAAACGCAAA AGATCACCGG TATCCTTTTG
GTTGGTAAAA CCGATAAAGC GATCATCAAT AAACTACCTA AGCGCCTCGC AGACAGCATT
TGTTATATCG ACTTCTCAGA CAGCAACAGC ATGTACGACA GTGTTGATAT CGATCTTGCT
CGCATCAGTA AGCAAGTTGT CGACTTCTTC GTCGAACAAG GTTACCAGCG CATTGGTTTT
ATTGGCGGAC AAGACGAACC CAACACGGCG GACATTCGTG AAAACGCTTT TGTGGAATAC
GGCAACCTAA AAGGTGTTGT ATCAGAGAAC GACATTTACC GCGGCGATTT TTCTAGCCTA
TCGGGTTACG ACTTAGCCAA AGCGATGTTG GCAAAAGGCG ACTTTCCGAC AGCACTCTTT
ATCGCATCAG ACTCGATTGC GATTGGGGTT TTACGTGCCA TCCATGAGTT CGGTTTGAAC
ATTCCACAAG ACATTGCTCT GATCAGTGTG AATGACATTC CAAACGCGCG CTTTACCTTC
CCACCGCTCT CTACTGTGCG AATTCACTCA GAGATGATGG GCATACAAGG GGTAAACTTA
TTGGTAGAAA AATACCGCGA TGGCCGTGCG CTGCCATTGC AAGTTCACGT ACCAAGCAAA
CTCAAACTGC GCGGCACGAC TAAGTAG
 
Protein sequence
MATLKDIATE AGVSLATVSR VLNDDPTLSV KEETKHRILE IAEKLEYRTS SSKKATKEAK 
QKHHFLALYN YKQEAEVNDP YYLSIRHGIE TQCDRLGITL TNCYDSVIDV ETQKITGILL
VGKTDKAIIN KLPKRLADSI CYIDFSDSNS MYDSVDIDLA RISKQVVDFF VEQGYQRIGF
IGGQDEPNTA DIRENAFVEY GNLKGVVSEN DIYRGDFSSL SGYDLAKAML AKGDFPTALF
IASDSIAIGV LRAIHEFGLN IPQDIALISV NDIPNARFTF PPLSTVRIHS EMMGIQGVNL
LVEKYRDGRA LPLQVHVPSK LKLRGTTK