Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03322 |
Symbol | |
ID | 5553217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3354470 |
End bp | 3356239 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908803 |
Product | hypothetical protein |
Protein accession | YP_001446497 |
Protein GI | 156975590 |
COG category | [R] General function prediction only |
COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTGTTT TGGAGAGTAT TAATCTTTTT CGCTACTACG AACGTGTAGA GAGTTTTGAG CTGCGAGAGG AATACGCGGT GACGCTTGCC GAGATTGCAG ACAAGATGTT CACCAGCCCA AGGCATGCCC GAGCTATTCT CAAGCAGATG AATGCGCTCA ACTGGATCGC TTGGATACCC AGAGTGGGGC GTAACCAGCG TTCGACCTTA ATTCGTAACA TCGCTCGTAC AGAGGTGAAG CGCTCTATTG CTCTGGAGTG GATCAAAGAG AGCAAATACG ACCGAGCACT TGAGTTTCTT GACTTCGACC AAGTGGTGTT TGAGCAACTG CTAAGGCAAA CTTCCGGTGC CCAAGTGACA GAAGGCAAAG TCAGTGTACA ACTTACCTAT AACCGCTCTT TTGCTACGCT CAATCCAATC ACACCGCAAC GAAACAGCGA GCGTTTCTTA ATTCGTCAAA TTCACGCTTG CTTGGTTTCC ATGACACCTG AAGGCGAGTT AGTCGGAAAC ATTGCGCATC ATTGGCAAGC CGATGAAGAG TGGCGAACAT GGACGTTTTA TCTTCGTCCG TCTGTTTGCT TTCATCATGG CGGAAAAGTG GATGCAGAGT TGATGGTGAA GTTACTAAAG CATTGGCAGC AGCTTCCATA TTATCAAAAT GAACTCGATC ACCTTGAAGC GGTTTCTGTT GAGTCGCCTT ATCGATTTTC CGTTCAACTT ACACGGCCAG AAAAAGGCTT TGCTGCATTA TTGAGTGATC TGAAATACTC TTTACAGCCT GTCGAGCAAC TCAATAACCT ATCTTCCGAT AGCATCGGCT GTGGCATTTT CTCTCTGGAA TCGCACACGA ACAACAAACT TACCTTGGTG GCGAATGAGC GCTTCCATGG ATTTCGCTCC CTCACTGATA AAGTCACCAT CTGGTCTTTA AACAGTGGCA AGAAGGAGGG TACAAAGGCT TCCAAGTACC CCCACGATTT ACCTAAAACA GAGCAGTACT CGAAAAAGGT CATCACCAAC TCTCCAGATG AAGAAGTGGA TGAGCGCATC ATCGATGCCA AACACACAGC ATCGAAAGAT CGCGTGGAAG AAGGGTGCTT GTTTATGATT TTCAATCACA ATGATCCTAA CTTATCGCAC GCTCAGAGAC GTTGGCTGAG TGATGCCTTG AGTGGCGAGA ACATCTGGCA GCAGTTGGAG CGCAACGAAA CCACCTTCGG GGCTGAGATC GCACATAACT TTTTCCCCTT CTGGCACAAC GTCAAATACC TGAGAAGCGA TGAAGTAGCG CTACCGAGTT CAATCCGAAT CGCCTGTTAT TCCCATCTTG GTATTCAACG TAGTGCGAGA GCCGCTGAGC AAATCTTGAT GGAGCATGGC ATCAAGGTTG AAGTGAACGT TTATTCGTTT GAAGCATTCA TTGAAAAAGC GTCTGGAGAG GGCTTTAGTG AAGAGATTGT GTTAAGCAGT TTTAACTTGG ATGACAACCG ACAAATCTCG GCTTTACTGT TTTTCCTCAG CGATCCCATT TTGCACGCCA CGATCGGATC TGACGTCAGC GACTGGCTGG TGGCTGAGAT CAACCAAATT CGACAGTTTA GCGCCCCGGA AGATTACTTC ACTATGTTAG AGCAACTTGG CTCTGTGCTG ATCTATGAAG GTGTGGTTAG TCCGATGCTT CACCACCGAC AAACACTTAG CTTCCAAGAC ATATTCAAAG GTGTAGAGAT CACGGCGTGG GGCTGGCCGA AGTTGAGTGA GATTTGGTAA
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Protein sequence | MPVLESINLF RYYERVESFE LREEYAVTLA EIADKMFTSP RHARAILKQM NALNWIAWIP RVGRNQRSTL IRNIARTEVK RSIALEWIKE SKYDRALEFL DFDQVVFEQL LRQTSGAQVT EGKVSVQLTY NRSFATLNPI TPQRNSERFL IRQIHACLVS MTPEGELVGN IAHHWQADEE WRTWTFYLRP SVCFHHGGKV DAELMVKLLK HWQQLPYYQN ELDHLEAVSV ESPYRFSVQL TRPEKGFAAL LSDLKYSLQP VEQLNNLSSD SIGCGIFSLE SHTNNKLTLV ANERFHGFRS LTDKVTIWSL NSGKKEGTKA SKYPHDLPKT EQYSKKVITN SPDEEVDERI IDAKHTASKD RVEEGCLFMI FNHNDPNLSH AQRRWLSDAL SGENIWQQLE RNETTFGAEI AHNFFPFWHN VKYLRSDEVA LPSSIRIACY SHLGIQRSAR AAEQILMEHG IKVEVNVYSF EAFIEKASGE GFSEEIVLSS FNLDDNRQIS ALLFFLSDPI LHATIGSDVS DWLVAEINQI RQFSAPEDYF TMLEQLGSVL IYEGVVSPML HHRQTLSFQD IFKGVEITAW GWPKLSEIW
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