| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03315 |
|---|
| Symbol | glpD |
|---|
| ID | 5553027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 3347508 |
|---|
| End bp | 3349067 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908796 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001446490 |
|---|
| Protein GI | 156975583 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCC AACAAAATGC TTCCACGACG AATTCATCCC CTACTCTAGA TATGATCGTG
ATCGGCGGCG GCATTAACGG GGCCGGTATT GCTGCTGATG CTGCTGGCCG TGGTCTAAGC
GTCGGTTTGT ACGAAGCTAA CGACTTCGCA TCAGCAACCT CTTCTGCAAG TTCAAAACTG
ATCCACGGTG GATTACGTTA CCTTGAGCAC TATGAGTTTC GTTTGGTTTC GGAAGCGCTC
GCTGAACGAG AAGTACTCTT ACGTAAAGCA CCACACATCG CATGGCCTAT GCGTTTTCGT
TTACCTCATC GACCATTTTT ACGCCCAGCT TGGATGATCC GCTGTGGTTT GTTCCTCTAC
GATAACTTGG GTAAACGAAC CACTCTTCCA GGCAGCAAAA CCATCAATCT TGCAAAATCT
GGTCTTCTAA AACCGGAAAT GAAAACTGGT TTCGAATATT CAGATTGCTG GGTAGATGAT
GCGCGTCTAG TGTTACTTAA CGTTCTGGCT GCAAAAGAGA ACAATGCCGA AGTTCGCAAC
TACTGCCGCG TAGAAAAAGC ACACCGTGAA GGCGGTATTT GGCATGTCAC TATTCATGAC
GTCACCACAG ACCAACGTTT CGAACGCAGA GCGAAGGCCC TAGTAAACGC CGCGGGTCCA
TGGGTGAAGC AATTCTTTGA TGAAGGATTG GATCAAACTT CTCCTCGTAA CATTCGTCTG
ATCAAAGGCT CACACATCGT TGTTCCTCGT ATCCATGACG AGCCACAAGC CTACATCCTA
CAAAACAAAG ATAACCGTAT CGTGTTTATG ATCCCTTACT TAGATAAGTT CTCGATCATC
GGTACAACGG ATGTAGAATA CAAAGGCGAC CCTCGAAAAG TATCTATTTC AGAGGAAGAA
GTCGATTATC TAATCGATGT CGTCAATCAG CATTTCGTCC AGCAATTAAA CAAGGATGAT
GTTGTGTGGT CGTTCAGCGG TGTACGTCCG CTGTGTGATG ATGAGTCTGA TTCACCGCAA
GCCATTACAC GCGATTACAC TCTAGAGCTG GATGCTGAAT ACGATCAAGC ACCGTTACTT
TCTGTATTTG GCGGTAAACT CACGACTTAC CGTAAGCTTG GTGAGGCAGC CCTCAATAAA
CTTGCTCCTT TCCTACCTGA AATGGGTAAA GACTGGACGG CAAACCAAAC GCTTCCTGGC
GGTAACTTCA GCTGTAGCCA TGAGCAGCTA GTGAAGATGA TTCATGCGAA ATACTCATGG
GCATCAGAAG CGTTGCTGCT GCGCTACGTG ACTCAGTTTG GTACCCAAAC TTGGGACCTG
ATGGCAGGCA CTAATAGCAT AGAAGACCTT GGTCATTGCT TCTCAGAGCA AGCAAGTGGC
GTATATCAAC GTGAAATTGA TTACTTGATG AATCACGAAA TGGCGCTCAC CGATGAAGAC
ATCTTATGGC GTCGTACAAA ACTTGGTTTA TACATGAACG AAGAGGAGAA AATCGCACTG
GCAGAATATC TACAAGAGAA GCTGCAACAG AAAGTCGTTA GCCTCTCACA AGTAAGTTAA
|
|---|
| Protein sequence | MSIQQNASTT NSSPTLDMIV IGGGINGAGI AADAAGRGLS VGLYEANDFA SATSSASSKL
IHGGLRYLEH YEFRLVSEAL AEREVLLRKA PHIAWPMRFR LPHRPFLRPA WMIRCGLFLY
DNLGKRTTLP GSKTINLAKS GLLKPEMKTG FEYSDCWVDD ARLVLLNVLA AKENNAEVRN
YCRVEKAHRE GGIWHVTIHD VTTDQRFERR AKALVNAAGP WVKQFFDEGL DQTSPRNIRL
IKGSHIVVPR IHDEPQAYIL QNKDNRIVFM IPYLDKFSII GTTDVEYKGD PRKVSISEEE
VDYLIDVVNQ HFVQQLNKDD VVWSFSGVRP LCDDESDSPQ AITRDYTLEL DAEYDQAPLL
SVFGGKLTTY RKLGEAALNK LAPFLPEMGK DWTANQTLPG GNFSCSHEQL VKMIHAKYSW
ASEALLLRYV TQFGTQTWDL MAGTNSIEDL GHCFSEQASG VYQREIDYLM NHEMALTDED
ILWRRTKLGL YMNEEEKIAL AEYLQEKLQQ KVVSLSQVS
|
|---|
| |