| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03314 |
|---|
| Symbol | |
|---|
| ID | 5552936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 3346537 |
|---|
| End bp | 3347328 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640908795 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001446489 |
|---|
| Protein GI | 156975582 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAAA TACCAAGACA CCAACAGATT GTTGAGTTGG TGAAAAAACA AGGCTATGTC
AGCACGGATG AGCTGGTAGA AAAATTTAAT GTTAGTCCTC AAACTATTCG CCGCGACCTA
AACGACCTCG CAGATGAAAA CAAAATTCGT CGCTACCACG GTGGTGCAAC CATTCCTCTC
AGTTCAGAGA ACACCTCATA CAACACGCGT AAAGCGCTTA ACTTCAATGA AAAAGATGTC
ATTGCGGAAG AACTCGTAAA ACACATTCCA GATGGCGCAA CCTTGTTTAT TGATATTGGC
ACGACTCCAG AAGCCGTCGC TCGAGCGCTC AATAAAAACC ACAAACAGCT TCGCGTGGTG
ACCAATAACA TTAATGTTGC CACCATTCTT TTACCGAACC CGGAAATCAA AGTGATTTTA
GCGGGTGGTG AAGTTCGCAA CCGAGACGGC GGCATTGTCG GTGAAGCGAC GCTCGATTTC
GTCAAACAAT TCCGCCTCGA CTTCGGTATT TTAGGCATCA GTGGTATCGA TTTTGATGGC
TCACTGCTGG ACTTTGATTA CCATGAAGTT CGCGTTAAAC AGGCGATTAT CGATAACAGT
CGCAGCGTAT TCCTTGCCGT TGACCATTCG AAGTTTGGCC GTAATGCGAT GGTGAAACTG
GGCAATATCG CGCAATTGAA CATGGTATTC ACCAACAAAC AACCACCAGA AGAGATTCTC
GCAATTCTAA AAGAAGCCGC AGTTCCGCTC GAAGTGATTG ATACACAAAT AGAAAGAGTC
GCAACCGAAT AG
|
|---|
| Protein sequence | MKQIPRHQQI VELVKKQGYV STDELVEKFN VSPQTIRRDL NDLADENKIR RYHGGATIPL
SSENTSYNTR KALNFNEKDV IAEELVKHIP DGATLFIDIG TTPEAVARAL NKNHKQLRVV
TNNINVATIL LPNPEIKVIL AGGEVRNRDG GIVGEATLDF VKQFRLDFGI LGISGIDFDG
SLLDFDYHEV RVKQAIIDNS RSVFLAVDHS KFGRNAMVKL GNIAQLNMVF TNKQPPEEIL
AILKEAAVPL EVIDTQIERV ATE
|
|---|
| |