Gene VIBHAR_03312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03312 
Symbol 
ID5555918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3343917 
End bp3344771 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content48% 
IMG OID640908793 
Producthypothetical protein 
Protein accessionYP_001446487 
Protein GI156975580 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGA ACAAACACCC CTCACTGCTC GGAGAATGTT TGGCCGAGTT TATCGGTACA 
GGATTACTTA TCTTTTTTGG CGTAGGCTGT GTTGCTGCAT TAGTGTTGAC CGGAGCTCAA
TTTGGTCAAT GGGAAATCAG TATTGTATGG GGCTTTGGCG TCGCCATTGC TATTTACTGT
ACTGCGGGCG TATCCGGTGC ACACATCAAT CCTGCCGTTA CCATCGCACT AGCCATGTTC
CATGGTTTCG ATAAGGCGAA AGTGGTGCCT TATATCATTG CGCAAATGCT CGGTGCTTTT
TGCTCTGCCG CTTTGGTTTA CAGCCTGTAC AGTAACCTGT TTACTGATTA CGAAATCGCA
CACAATTTCG TTCGTAGCAG CAAAGAGGCT CTCGCCACAG CAGGCATTTT CTCGACTTAC
CCACACGCTT CTCTCTCTTT CTTTGGCGCT TTTGCTGTGG AATTCGTGAT TACTGCAGTG
CTGATGTTTG CCATTCTTGC TCTTGGTGAT GAGAACAACG GCGCACCTCG CGGCGCGATG
AACCCATTAC TTATCGGTAT TCTCATTGCG GTTATCGGTA GTTCTTTAGG CCCACTTACT
GGCTTTGCGA TGAACCCTGC TCGTGACTTC GGCCCTAAGC TGTTTGCTTA CTTTGCAGGC
TGGGATTACG CACTGACCGG TGCACGCGAA ATCCCATACT TTATTGTTCC AATTCTTGCT
CCTATCGCAG GTGCTTGTTT CGGTGGTTGG TTGTACCCGA AAGCAATTGC TGCGTATCTG
CCACAACAAG GTCATGGCTG TACTATTCCT AATCAGTGCG AGACCGAAGA AGAAGCAGAA
CAAGCTCAAG CTTAA
 
Protein sequence
MTTNKHPSLL GECLAEFIGT GLLIFFGVGC VAALVLTGAQ FGQWEISIVW GFGVAIAIYC 
TAGVSGAHIN PAVTIALAMF HGFDKAKVVP YIIAQMLGAF CSAALVYSLY SNLFTDYEIA
HNFVRSSKEA LATAGIFSTY PHASLSFFGA FAVEFVITAV LMFAILALGD ENNGAPRGAM
NPLLIGILIA VIGSSLGPLT GFAMNPARDF GPKLFAYFAG WDYALTGARE IPYFIVPILA
PIAGACFGGW LYPKAIAAYL PQQGHGCTIP NQCETEEEAE QAQA