Gene VIBHAR_03310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03310 
SymbolglpQ 
ID5552860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3340552 
End bp3341622 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content46% 
IMG OID640908791 
Productglycerophosphodiester phosphodiesterase 
Protein accessionYP_001446485 
Protein GI156975578 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AGTCAGTATG CATTACTTTT TTGGCGTGTA GCCTATCTGC CGGAGCTATT 
GCCCAGCCCC TTGTTATCGC TCATCGTGGC GCATCCGGTT ACTTACCTGA ACATACATTG 
GAAGCCAAAG CCCTTGCGTA CGCAATGAAA CCAGATTACA TCGAGCAAGA TGTGGTGATG 
ACTAAAGACG ATCAATTGGT CGTGCTGCAT GACCACTATC TCGATCGCGT GACCGATGTA 
GCTGAGCGTT TTCCAGATCG AGCTCGTAAA GATGGTCGTT ACTACGCGAT TGATTTTACC 
TTGGCAGAAA TCAAATCACT GCGCGTGACA GAAGGCTTCA AAATCAATGA TAAGGGTGAC 
AAGGTAGCAG GTTACCCGAC TCGATTCCCA ATGTGGAAAT CAGACTTCAC CGTACCTACC 
TTTGCTGAAG AGATTGAGCT GATCCAAGGC TTAAACAAAA CACTGGGCTA TGACATCGGT 
ATTTATCCTG AGATCAAAGC GCCGTGGTTC CATCGCCATG AAGGTAAAGA CATCTCAAAA 
GCAGTACTGA AAGTTTTAAA GCAGTACGGC TACGACTCAC AAGACGACAA AGTGTACCTT 
CAGTGTTTTG ATGCCAATGA ACTTCAGCGC ATCAACAGTG AGCTTATGCC TGCAATGGAC 
ATGGATTTAA AGCTCGTTCA GCTCATGGCT TACACCGACT GGAACGAGAC CATGGAGTAC 
AAAGGCGACA AAGCAACACC ATACAGTTAT GACTGGATGT TTGAAGCCAA TGGTATGAAG 
AAGGTAGCCC AGTACGCGGA AGGAATTGGT CCTTGGAAGC CAATGTTGGT GGATGACAAA 
TCAACCAAGG ATAACATCAT CATCAAACCT TTGATGAAAG CAGCAAAAGA CGCAGGCTTG 
CAAGTGCACC CTTACACTTT CCGAGCGGAC CCTGGACGTA TTCCTGCTTA CACCGACAGC 
TTCGATGGCA TAATGGATAT CTTCTACAAT CAGGTGAAAG TGGATGGTTT GTTTACTGAC 
TTCCCAGATA AAGCGGTGAG CTTTCTAAAC AAGCAAAGTT CTAAAAACTG A
 
Protein sequence
MKIKSVCITF LACSLSAGAI AQPLVIAHRG ASGYLPEHTL EAKALAYAMK PDYIEQDVVM 
TKDDQLVVLH DHYLDRVTDV AERFPDRARK DGRYYAIDFT LAEIKSLRVT EGFKINDKGD 
KVAGYPTRFP MWKSDFTVPT FAEEIELIQG LNKTLGYDIG IYPEIKAPWF HRHEGKDISK 
AVLKVLKQYG YDSQDDKVYL QCFDANELQR INSELMPAMD MDLKLVQLMA YTDWNETMEY 
KGDKATPYSY DWMFEANGMK KVAQYAEGIG PWKPMLVDDK STKDNIIIKP LMKAAKDAGL 
QVHPYTFRAD PGRIPAYTDS FDGIMDIFYN QVKVDGLFTD FPDKAVSFLN KQSSKN