| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03287 |
|---|
| Symbol | |
|---|
| ID | 5556416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 3310487 |
|---|
| End bp | 3311308 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640908768 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446462 |
|---|
| Protein GI | 156975555 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAT CACTTTTAGC TCTTAGCCTT CTAGCGGCTA CTTCAGCTCC AGTTATGGCT
GCTGACTACT CAGATGGCGA CATCCACAAG AACGATTACA AGTGGATGCA ATTCAACCTA
ATGGGTGCAT TCGATGAGAA AGGTGCAGGT CCAGAATCTA GCCACGATTA CCTAGAGATG
GAATTCGGCG GTCGCTCTGG TATCTTCGAC CTATACGGTT ACGTTGACGT ATTCAACCTA
GCTTCTGACC CAGGCAGCGA CAAAGCTGGC GCAGAAAAAA TCTTCATGAA GTTCGCTCCA
CGTATGTCTC TGGACGCACT AACTGGTAAA GACCTGTCTT TCGGTCCAGT TCAAGAGCTA
TACGTTGCAA CTCTTATGGA ATGGGGTGGT AACTCTGGCG TAAACAACCA AAAAATCGGT
CTAGGTTCTG ACGTAATGGT TCCTTGGTTG GGTAAAGTAG GCCTAAACCT ATACGGTTCA
TACTACGGCA ACAACAAAGA TTGGAACGGT TTCCAAATCT CGACTAACTG GTTCAAACCA
TTCTACTTCT TCGAGAACGG TTCATTCATT TCTTACCAAG GTTACATCGA TTACCAATTT
GGTATGGAAG ACAAAGAAGG CAACAAGTTC AACACTAACA CGTCAAACGG CGGTGCTATG
TTTAACGGTA TCTACTGGCA CTCTGATCGT TTCGCAGTTG GTTACGGCCT GAAACTATAC
AAAGACGTAT ACGGCTTTGA AGATGGTAAA GCACTACCAT GGACTCAAAC TGTTGACTCT
TCAGGCGTAG CACACTACGT TGCTGTAACT TACAAGTTCT AA
|
|---|
| Protein sequence | MRKSLLALSL LAATSAPVMA ADYSDGDIHK NDYKWMQFNL MGAFDEKGAG PESSHDYLEM
EFGGRSGIFD LYGYVDVFNL ASDPGSDKAG AEKIFMKFAP RMSLDALTGK DLSFGPVQEL
YVATLMEWGG NSGVNNQKIG LGSDVMVPWL GKVGLNLYGS YYGNNKDWNG FQISTNWFKP
FYFFENGSFI SYQGYIDYQF GMEDKEGNKF NTNTSNGGAM FNGIYWHSDR FAVGYGLKLY
KDVYGFEDGK ALPWTQTVDS SGVAHYVAVT YKF
|
|---|
| |