Gene VIBHAR_03279 details

Gene Information

• Locus tag: VIBHAR_03279
• ID: 5554283
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 3304877
• End bp: 3305422
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640908760
• Product: hypothetical protein
• Protein accession: YP_001446454
• Protein GI: 156975547
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTACGTA AAGCTATTCT TTCTCTCGCA CTTCTGAGCT GCAGCGTTTT TGCTGGTCCT 
AAAGTGGCGT TTGAAACTAC GTTAGGTAAC TTCACCGTAG AGTTAAATGA AGAAAAAGCA 
CCCGTTACGG TCGCGAACTT CCTTAAATAT GTGGAAGATG GTAGCTACGA AGGTACGATT 
TTTCATCGCG TGATTCCTGG CTTTATGGCG CAAGGTGGTG GCTTTAACCA AGACATGCAA 
ATGGTTAAGA CCTACGCACC AATCAAAAAC GAAGGGAATA ACGGTTTGAA CAATGACCGT 
GCCACTATTG CAATGGCGCG CACCAATGCT CCTGATTCGG CAACACGTCA GTTCTTCGTA 
AACTTGGTCG ACAATGACTT CTTAAACTTC GGTTCTCGCC CACCGGGTTA TGCAGTATTT 
GGTGAAGTCA CCGAAGGCTT CGATGTCATT CAAAAAATGG CGACTCAGCC AACCAAATCC 
ATCGGTCGCA TGCGCGATGT CCCAGAGACA CAAATCGTCA TCACCAAAGC AACACTACTC 
AAGTAG 

 

Protein sequence

MLRKAILSLA LLSCSVFAGP KVAFETTLGN FTVELNEEKA PVTVANFLKY VEDGSYEGTI 
FHRVIPGFMA QGGGFNQDMQ MVKTYAPIKN EGNNGLNNDR ATIAMARTNA PDSATRQFFV 
NLVDNDFLNF GSRPPGYAVF GEVTEGFDVI QKMATQPTKS IGRMRDVPET QIVITKATLL 
K