Gene VIBHAR_03277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03277 
Symbol 
ID5554384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3303111 
End bp3304268 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content45% 
IMG OID640908758 
Product16S RNA G1207 methylase RsmC 
Protein accessionYP_001446452 
Protein GI156975545 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG AATTAGACCT TCACGATCGT AGCCTCACGC TGCATCGTTT CCCAAAGCGC 
TCCAACGAAA CTCTTCAAGC ATGGGATGCG GGTGATGAGT ATCTTATCAA TAACGTAGAA 
GGAATGGCGT TGCCAGATAA TCAAAATATC GTAGTTGTTA ATGATAACTT CGGTGCGTTG 
GCATGCTGGT TTTCAGACAG GCACAATGTG ACGTTGATGA GTGACTCTTT CATCTCACAC 
AAGGGTGCGC AACAAAACCT TGCAGACAAC CAATGCAATC AAGTGTCTTT TCTCTCTACG 
ATGGATGACA TTCCAGAGAA TACAGACTTA GTTTTGATGC AACTGCCAAA AAGTAACCGC 
CATCTAGTTT GGTTACTCAG TCAACTGCGT AAAACGTTGC CAGCATCCTG CCCTATTGTT 
GCGGTCAACA AAGCGAAAGA GATCCATACG TCGACACTCA AACTGTTTGA GAAGTACTTA 
GGCGAGACTA AAACCTCTCT AGCGTGGAAA AAGCATCGTT TAGTATTCTC AACTGCCAAT 
GCTCAACCAG TCATAGATGT CGACCCAATG ACGATTTGGG GCATTGAAGG TGAGGGTATT 
CAACTGAAAA ACCTGCCAAA TGTATACTCA GGCGAAAGCT TGGATCTCGG CGCACGTTTT 
ATGCTGCAAC ACCTTCCTCA AGATCCAACG TTGAAACACG TCATCGACCT TGGCTGTGGT 
AATGGTCTGC TGTCAGTAAA AATGGGGCAA TTAAATCCTC AAGCTCGTTT AACCAGCGTG 
GATGAAAGCT TTATGGCTGT CGAGTCAGCA AAACAAAACT TGCTCGATAA CCTAGGTGAC 
GCCCGCGATA TTCAATGCAT TGCGAACAAC TGCTTAGATG GTTTCACCCC AGACTGCGCA 
GACATGGTGA TGTGCAACCC ACCGTTCCAT CAGCAGCAAG CGATCACTGA CCACATTGCG 
TGGCAAATGT TCTGCGATGC GAAACAAATA CTGAACCAAG GCGGTAAATT ATTGGTCATA 
GGTAACCGTC ACCTTGGTTA CGATGCGAAG CTGAAACGTC TGTTTGGCGA CAAAAATGTG 
AAATTAGTCG CTTCTAACAA TAAGTTCGTG ATTTTACAGG CAACGAAAAA TCCTGCTAAA 
TTAGGCGCCA AGCAATAA
 
Protein sequence
MKTELDLHDR SLTLHRFPKR SNETLQAWDA GDEYLINNVE GMALPDNQNI VVVNDNFGAL 
ACWFSDRHNV TLMSDSFISH KGAQQNLADN QCNQVSFLST MDDIPENTDL VLMQLPKSNR 
HLVWLLSQLR KTLPASCPIV AVNKAKEIHT STLKLFEKYL GETKTSLAWK KHRLVFSTAN 
AQPVIDVDPM TIWGIEGEGI QLKNLPNVYS GESLDLGARF MLQHLPQDPT LKHVIDLGCG 
NGLLSVKMGQ LNPQARLTSV DESFMAVESA KQNLLDNLGD ARDIQCIANN CLDGFTPDCA 
DMVMCNPPFH QQQAITDHIA WQMFCDAKQI LNQGGKLLVI GNRHLGYDAK LKRLFGDKNV 
KLVASNNKFV ILQATKNPAK LGAKQ