Gene VIBHAR_03257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03257 
Symbol 
ID5554503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3279827 
End bp3281191 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content48% 
IMG OID640908738 
Producthypothetical protein 
Protein accessionYP_001446432 
Protein GI156975525 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC AAACTTCTTC TCAGCCTCGT GAGCATTTCG GCTCACGCCT AGGATTCATT 
TTAGCGGCAG CAGGTGCTGC AGTGGGTCTA GGTAATATTT GGGGCTTTCC TACCCAAGCA
GCAAGTAACG GCGGTGGCGC CTTCTTGTTG GTGTACTTGG TGATGATTCT TATCGTTGCA
TTCCCAATGC TGGTGGTTGA AATGGCGATC GGTCGTCATG GTCAAGCAAA CCCAGTAGAC
AGTATGCGTT CTTTAACAGA CAACCCTGTG GGCAAGAAGC TTGGCGGCCT AGTTGGTTGG
ATTGGCCTGA GTGTACCAAG TGCGGTTTTG GCGTTTTACT CGATTGTAGG CGGCTGGTTG
ATCTGCTTTA TGTTGGGCGC AGTTACCGAC ATCATGGGCA TGGAAGCGGC GACACAATGG
TTGAAAGGCT TCAGCGTTGA ACGCAACTTG TTTGGTACGA TTACATTTTA TGTATTAACC
ATTTTGATCG TACAAGGCGG CGTGAAACAG GGTATTGAGA AGTGGTCTAC ACGTCTAATG
CCAGCACTGT TTGTTCTGTT CGGTTTGCTG TTCATCTACA TCATGACGCA AAACGGTGCG
ATGGAAGGTT TGAAGCACTA CCTAGTGCCT GATTTCGAGA AAGTATGGGA TCGCAAACTT
ATCCTTGCCG CGATGGGTCA AGGCTTCTTC TCACTGACCA TCGGTGGCTG TTCGATGCTT
ATTTATGGCT CTTACCTAAG TAAGAAAGAG AACTTGCCTA AGATGGCGAT GAACGTGACC
ATGGTAGACA CTGCCGTTGC CTTTATTGCA GGCCTAGTAG TGATGCCGGC AATGTTCGTT
GCGATGCAAA AAGGCGTTCA AATCTATGCA GAAGATGGCT CGCTACTAAG TTCAGATACG
CTGGTATTTA CAGTTCTACC GCTGATGTTT GATAGCTTAG GTCTGCTTGG ACAACTGTTC
TCAATCGTGT TCTTCTTACT ACTGACGATT GCAGCATTGA CGTCTTCTAT CTCGATGCTT
GAATGTCCGG TTGCTCTAGT AAGTGAACGA TTCAATACTA AACGCAGCAC GACAAGCTGG
GTATTGGGTG GCCTGATTGC GCTGTTCAGT GTCGTTATCG TATTTAACTT CGGTGCACTG
TTTGGCATGG TTGCAACCAT CGCAACGCAA TACCTACAGC CTATGGCGGC GCTATTGTTC
TGTCTATTTG GTGGTTGGGT ATGGAATCGT CACTCGAAAA TCAAAGAGCT TGAACAAGGT
TGTCCGGAGT TCACTCAAGG TTGGTTCGGT AAGTTGTGGC CAGCATACGT GAAGTTCGTT
TGTCCGATTC TGGTCGCGAC AGTCATCTGG GCTTCATTTG GCTAA
 
Protein sequence
MTQQTSSQPR EHFGSRLGFI LAAAGAAVGL GNIWGFPTQA ASNGGGAFLL VYLVMILIVA 
FPMLVVEMAI GRHGQANPVD SMRSLTDNPV GKKLGGLVGW IGLSVPSAVL AFYSIVGGWL
ICFMLGAVTD IMGMEAATQW LKGFSVERNL FGTITFYVLT ILIVQGGVKQ GIEKWSTRLM
PALFVLFGLL FIYIMTQNGA MEGLKHYLVP DFEKVWDRKL ILAAMGQGFF SLTIGGCSML
IYGSYLSKKE NLPKMAMNVT MVDTAVAFIA GLVVMPAMFV AMQKGVQIYA EDGSLLSSDT
LVFTVLPLMF DSLGLLGQLF SIVFFLLLTI AALTSSISML ECPVALVSER FNTKRSTTSW
VLGGLIALFS VVIVFNFGAL FGMVATIATQ YLQPMAALLF CLFGGWVWNR HSKIKELEQG
CPEFTQGWFG KLWPAYVKFV CPILVATVIW ASFG