| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03241 |
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| Symbol | |
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| ID | 5553837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3268879 |
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| End bp | 3269646 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640908722 |
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| Product | tRNA pseudouridine synthase C |
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| Protein accession | YP_001446417 |
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| Protein GI | 156975510 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGAAC AAGAAATATC ACCATCTGTT GACCCCGTTG TATTAGAGAT CGTTTATCAG
GACGAGTACT TTGTTGCGGT GAACAAACCT GCAGGTATGT TAGTCCATCG CAGTTGGTTG
GATAAGCATG AGACTCAATT CGTGATGCAA ACGCTACGCG ATCAAATTGG TCAGCATGTT
TTCCCATTGC ACCGTTTGGA TCGTCCTACT TCTGGTGTGC TTGTGTTTGC TTTGTCCAGT
GAAGTGGCAT CGCAAGTCAT GCCAATGTTT GCAGAGCATA AGATGGAGAA GACCTATCAC
GCGATCGTTC GTGGCTGGAT CGAAGAAGAG GGTGTGCTAG ATTACGCTCT GAAAGTTGAA
CTCGATAAGA TCGCCGATAA GTTTGCTTCG CAAGAGAAAG AAGCACAAGA AGCAGTAACG
GCATACAAAC CGCTAGCAAA AGTGGAAGTA CCTTATTCAA CGGGTAAGTT CCCAACCACG
CGCTACTGTT TGATGGAAAT GAAGCCAAAG ACAGGGCGTA AGCACCAGCT GCGTCGTCAT
ATGGCTCACC TGCGTCATCC TATTGTTGGT GATACAACAC ATGGTGATGG TAAGCACAAC
AAGTTGTATC GCACGGAATT CGACTCTCAC CGACTGTTGC TGCATGCATC AGAGCTGCGC
TTTGTGCATC CGTTTACCGA CGAAAAAATC GTGATGAAAG CCAATATCGA TGAGACTTGG
CAGCAGTTGT TCACTCGATT TGAGTGGGAT GAATCGTTGG TAAAATAA
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| Protein sequence | MSEQEISPSV DPVVLEIVYQ DEYFVAVNKP AGMLVHRSWL DKHETQFVMQ TLRDQIGQHV
FPLHRLDRPT SGVLVFALSS EVASQVMPMF AEHKMEKTYH AIVRGWIEEE GVLDYALKVE
LDKIADKFAS QEKEAQEAVT AYKPLAKVEV PYSTGKFPTT RYCLMEMKPK TGRKHQLRRH
MAHLRHPIVG DTTHGDGKHN KLYRTEFDSH RLLLHASELR FVHPFTDEKI VMKANIDETW
QQLFTRFEWD ESLVK
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