Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03237 |
Symbol | rpsB |
ID | 5555977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3263519 |
End bp | 3264280 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640908718 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001446413 |
Protein GI | 156975506 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAGGC CTAACCCCAT AGAGGATTTT AAAATGGCAA CTGTATCAAT GCGCGATATG CTGAAAGCTG GTGTTCACTT CGGTCACCAA ACTCGTTACT GGAACCCAAA AATGAAGCCA TTCATCTTTG GTGCTCGTAA CCGCGTTCAC ATCATCAACC TAGAAAAAAC TGTACCAATG TTCAACGAAG CTCTAGCTGA ACTAGCTAAA GTTGGCGAGA AGAAAGGTAA AGTTCTATTC GTAGGTACTA AGCGCGCTGC ATCTGAAGCT GTTAAAGAAG CTGCAATCGC AAGCAACCAA TACTACGTTA ACAACCGTTG GTTGGGCGGC ATGCTAACGA ACTACAAAAC AGTTCGTCAG TCAATCAAAC GTCTAAAAGA TTTCGAAGCA CAAGCACAAG ACGGTACTTT CGAAAAACTA ACTAAGAAAG AAGCTCTAAT GCGTACTCGT GAAATGGAGA AGCTAGAGAA ATCTCTTGGT GGTATCAAAG ATATGGGCGG CCTACCAGAC GCTCTATTCG TAATCGACGC TGATCACGAG CACATTGCAA TTAAAGAAGC TAACAACCTA GGTATTCCAG TATACGCTGT GGTAGATACT AACTCTAACC CAGACGGCGT TGACTACATC ATCCCAGGTA ACGACGACGC GATCCGCGCA GTTCAACTAT ACCTAAACGC TGCAGCTTCT GCAGTGACTG AAGGTCGCAA CAAAGATGTT GCAGTAGTTG CTGAAAAAGA CGGTTTCGTA GAAGCTGAAT AA
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Protein sequence | MWRPNPIEDF KMATVSMRDM LKAGVHFGHQ TRYWNPKMKP FIFGARNRVH IINLEKTVPM FNEALAELAK VGEKKGKVLF VGTKRAASEA VKEAAIASNQ YYVNNRWLGG MLTNYKTVRQ SIKRLKDFEA QAQDGTFEKL TKKEALMRTR EMEKLEKSLG GIKDMGGLPD ALFVIDADHE HIAIKEANNL GIPVYAVVDT NSNPDGVDYI IPGNDDAIRA VQLYLNAAAS AVTEGRNKDV AVVAEKDGFV EAE
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