Gene VIBHAR_03228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03228 
Symbol 
ID5554213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3253700 
End bp3254200 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content42% 
IMG OID640908709 
Producthypothetical protein 
Protein accessionYP_001446404 
Protein GI156975497 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAG CAGCTGGCCT AGGCCTTCTA GTACTTAGCT CTTCAATGTT TGCTAACGCG 
GCTGAAGCTG CTCAGAAAAT TGCTTATGTA AATACTGCTC AAGTTTTCCA AGCGCTTCCT 
CAACGCGAAG TAGTTCTACA AAAAATGCAG AAAGACTTTA AGAGCAAAGC AGATGAGCTG 
AAATCTATCC AAGCGCAAGC TAAGACTAAG ATTGAAAAGC TACAACGTGA TGGTGAGCTT 
CTAGGTCAAG ACGAAGTTGA AAAACTACGT ATCGACATCG CTAAACTAGA CAGCGAGTAC 
AAAGTGAAGG CACAAGCTCT AGAGAAAGCA AGTGCACGTC GCGAAGCTGA AGAGAAAGCG 
AAGCTATTCA AGACTATCCA AGACGCAGTG AAGAAAGTAG CAACTAAGAA AGGCTACGAT 
ATGGTAATCG ACATCTCTTC ACTTCAGTAC GGTAAGCCAG AATACAACAT CTCTGAAGAC 
GTAATTAAAG CTCTAAAATA A
 
Protein sequence
MIKAAGLGLL VLSSSMFANA AEAAQKIAYV NTAQVFQALP QREVVLQKMQ KDFKSKADEL 
KSIQAQAKTK IEKLQRDGEL LGQDEVEKLR IDIAKLDSEY KVKAQALEKA SARREAEEKA 
KLFKTIQDAV KKVATKKGYD MVIDISSLQY GKPEYNISED VIKALK