Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03214 |
Symbol | |
ID | 5554912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3238930 |
End bp | 3240516 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908696 |
Product | membrane-bound lytic murein transglycosylase D |
Protein accession | YP_001446391 |
Protein GI | 156975483 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTAA AGTACAGTTG GGCGTTGGCG TTACTACTTT CTGGCTGTCA ATTGACACAG TCAGATTCAA CAAACACTCC AACACCAGAA ACCAATAAGT CCGAGCAAGC GGTAAAACAA GACGCGGCTC AAGCGGACTC CAAGAAAAAG CTATCGATAG CAAAGAAACC TGCTAAAGAG ACGCCGAAAA CTCTTTCTCC TCAGGAACAA GAAGATGTAT GGCGTCGTAT CGGCATACAG CTTGAGATGG ACATCCCAGA CAACAAGAAA GTGGCTTACT ACCGTACATG GTATCTGAAG CATCCTAACC ACCTGCGCAC CGTTTCTGAG CGTGCACAGC CGTTTTTGTA CATGATTACA AAACGCATTG AAGAACGTGG TCTTCCAATG GAGTTGGCGC TTCTACCTAT CGTAGAGAGC TCATTTGACC CATTCGCGTA CTCACACGGC AGTGCGGCAG GTCTTTGGCA GTTCGTTCCT GGCACCGGCA AGATGATGGG CCTAGAGCAA AACTACTGGT ACGACGGTCG TCGTGATGTG TACGCAGCGA CAGATGCTGC TCTTGATTAC CTAGAGCAAC AAAGCGAGCG CTTTGACGGT AACTGGGACC AAGCGATTGC CGCTTACAAC AGTGGTGGCG GTCGTGTATC AAGCGCGATT CGTAAGAACA AAAAGCTAGG TAAACCTACA GACTTCTTCT CTTTGGACCT TCCAAAAGAG ACCAGCAGTT ACGTTCCTAA GCTACTTGCG CTTGCAGACA TCATTGCGAA CCAAGACAAA TACGGCATCG ACATTCCACC AATCGCGAAC AAACCTGTTC TGGTTCAGGT TGATCCAAAA GAACAATTAG ACCTAGCGAT TGCTGCCGAT TACGCAGGCA TTGGTGTCAA AGAGCTGCAA GGTTACAACC CGGCTTACAA CCAATGGTCT ACGGCACCTG ACGGCCCGCA CCAGCTTCTT ATTCCTATCG AGAAAAAGGA TCAGTTCCTT GCTCAGGTGA AAAAGAACCG TGGTAAAGGC ATGAAGGTCG CACGCTACAA AGTGAAGCGT GGTGACTCGC TCAGCGTATT GGCTCAGAAG TACGGTACGA CAACCAAAGT TATCCAACGT GCTAACGGCC TAACCAACAA CAACATTCGC GTTGGTCAGT ACCTAATGAT CCCAACGTCA ACTAAAGACG ATGCTAAGTA CGCACTTACT GCGGAAAATC GCCTAAACAA AACGCAATCT AAATCTCGCG GTCAATTCAA ACTGACTCAC GTTGTCCAAC CTGGTGAGAG CTTGTGGTCT ATCGCAAAAG AGAACAAGGT TTCTCATAAG TCTCTAGCGA AATGGAACGG CATGGGACCA AAAGACACCT TGCGCATTGG CCAAAAGCTG GTGATTTGGA AGAACTCAGA CAAGGGCGCC GTCATTCGCA CCGTTTTCTA TAACGTGCGT TCTGGCGATA CCATCAGTGG CATTGCGAGT AAGTTTAAGG TGAAGAGCAA CGACATCGTG AAATGGAATT CTCTTCAAAA GCAGAAGTAC CTGAAACCAG GTCAGAAGCT TAAGTTGTAT GTTGACGTAA CTAAGGTAAG TGTATGA
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Protein sequence | MRLKYSWALA LLLSGCQLTQ SDSTNTPTPE TNKSEQAVKQ DAAQADSKKK LSIAKKPAKE TPKTLSPQEQ EDVWRRIGIQ LEMDIPDNKK VAYYRTWYLK HPNHLRTVSE RAQPFLYMIT KRIEERGLPM ELALLPIVES SFDPFAYSHG SAAGLWQFVP GTGKMMGLEQ NYWYDGRRDV YAATDAALDY LEQQSERFDG NWDQAIAAYN SGGGRVSSAI RKNKKLGKPT DFFSLDLPKE TSSYVPKLLA LADIIANQDK YGIDIPPIAN KPVLVQVDPK EQLDLAIAAD YAGIGVKELQ GYNPAYNQWS TAPDGPHQLL IPIEKKDQFL AQVKKNRGKG MKVARYKVKR GDSLSVLAQK YGTTTKVIQR ANGLTNNNIR VGQYLMIPTS TKDDAKYALT AENRLNKTQS KSRGQFKLTH VVQPGESLWS IAKENKVSHK SLAKWNGMGP KDTLRIGQKL VIWKNSDKGA VIRTVFYNVR SGDTISGIAS KFKVKSNDIV KWNSLQKQKY LKPGQKLKLY VDVTKVSV
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