Gene VIBHAR_03186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03186 
Symbol 
ID5553845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3213113 
End bp3214132 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content49% 
IMG OID640908667 
Productlipoprotein 
Protein accessionYP_001446362 
Protein GI156975455 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT CAAGCCAGTT AGTGTTAAGT TCACTAGCTG TATTCGTATT GACTGCCTGT 
TCAGGTGGTG CTAACCAGCG TCGTCAAGCA AAGGACGACT TCGAGTATTT GAACACACCA
GCTCTGGAAG AGTGGAGTGT ACCGGCAGGT GCTGTTCCTC AGTTTTACCC TAACTACCGT
ATCCCACAAG GTGAGTACGC TGGTGGTATT GGTAAAGAAG TGGATATTCG TCCGCCGCAG
CAAGTATTGG AATTGATACC TGGTGCTCGC CTAGATCGCA GTAGCGACGG TGAAGTAACA
CTATGGCTGC TTCGCAAGGA TGAACTGGAT AAAGTTTGGC AAACCGTTCA AGAGATGGTT
TCAGAGAACA AGGTCCCGGT AGAGAACCAA ACGGACAATC GTATCGAGAC AGGCTGGGTT
ACTTGGAACT CACCTGATGA AGCCATGGAA ATCGGTAGCC GCTACGAAAT TACTCGTGGT
GAGATGAACG GTCGCCATGG CTTTAAAGTA AGCTTGATTG ATTGGCGTGA AGGCAACCAA
GTGAAAGAAG TAACACGTAC TAACCGTGAG CGTTACAACG TGTTTATGAC TAACTTGGTG
ACGGCTCGTT ACGACCAACA TGTCCGCGAA GAAGCCCAGC GTAAATCGCA AGAGCTCGTG
AAACACATCC CAATTACTAT GGGTAAAGAC CGCAGCGGTC TGCCAGTGAT CATTGCTCGT
GCTCAGTACA ATGTGGTTTG GAACCGTCTA CCAGATACGC TACCTAAAAT GGGCTTCAAG
ATTGAAGAGC GCAGCCAATC TCAAGGTACT GTGACTGCGA AGTACGCATC TCCAGATGAC
GCGTTCTGGA ATGACATCGG CGTGAAGCCA GTTGACCTAG CTCCGGGTGA GTACACCTTC
CTACTTGGTG ACTTGGGTAA CCGTACTTCT ATCAACATTA CTGACTCTGC TGGTAAGCCA
GTAGAAGAGG AATTCTTGAA GTCACTGGCG CCAGTACTTG CTGCTGTTGT GAAAGAGTAA
 
Protein sequence
MKLSSQLVLS SLAVFVLTAC SGGANQRRQA KDDFEYLNTP ALEEWSVPAG AVPQFYPNYR 
IPQGEYAGGI GKEVDIRPPQ QVLELIPGAR LDRSSDGEVT LWLLRKDELD KVWQTVQEMV
SENKVPVENQ TDNRIETGWV TWNSPDEAME IGSRYEITRG EMNGRHGFKV SLIDWREGNQ
VKEVTRTNRE RYNVFMTNLV TARYDQHVRE EAQRKSQELV KHIPITMGKD RSGLPVIIAR
AQYNVVWNRL PDTLPKMGFK IEERSQSQGT VTAKYASPDD AFWNDIGVKP VDLAPGEYTF
LLGDLGNRTS INITDSAGKP VEEEFLKSLA PVLAAVVKE