Gene VIBHAR_03165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03165 
Symbol 
ID5553124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3194271 
End bp3195308 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content46% 
IMG OID640908646 
Producthypothetical protein 
Protein accessionYP_001446341 
Protein GI156975434 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATA ACACCAACCA ATCCCATTTA GACTCAGTAG AGAATCAAGT AGAGCGTTAT 
AAGCAGGTTT TGGACGTGAT GCCCGCTGGT GTGATCTTAC TAGATACCCA TGGTGTAGTG 
CGTGAAGCCA ACCCAGAGGC GCACCGCATT CTTGAAATTC CACTGGTCGA CGAGAAATGG 
TTCAACATCA TCCAAGCGGT GTTTGATCCG CGCGAAGATG ATGGTCATGA AGTCTCACTG 
CGTAATGGTC GTAAAGTTCG TCTAGCGATC TCGGCATCGG CGACTGGCCA ACTCATTTTG 
ATCACCGATC TAACGGAAAC GCGTTTACTG CAATCTCGCG TGAGTGACCT ACAACGTTTG 
TCATCGTTAG GCCGTATGGT GGCGTCTTTG GCACACCAAG TCAGAACACC ATTATCGAGC 
GCCATGTTGT ATGCATCTAA TTTAGCAGCG CCAAATCTTC CTCCTGCGAC AAAAGATAGA 
TTTCAAAGCA AATTAATGGA TCGACTGCAC GATTTGGAAA AGCAGGTTAA TGATATGCTG 
CTTTTTGCCA AAGGTGGTGA TAATAGAGTT ATTAAGCCTT TTAATATTTC TCAATTGGTT 
ACCGAATATC AGCCAATGGT CGAAACCGCG CTGAAGAACA ACAACATTGA CTACTTCCTA 
GAAGTTGAAG AAGAACACAC TGAGCTGTTA GGCAACGCTA ACGCCATTGC TTCAGCACTA 
AGTAACCTAG TGATGAACGC GATTCAGATG TCTGGAAAGG AATCGCAGAT AGATGTCTTT 
TTCCGCCCTG TGAACGGTGA ATTGCGGATT TCCGTGCAAG ACAGCGGTCC GGGTGTACCA 
AAAGAACTGC AAGCAAAAAT TATGGAGCCA TTCTTCACCA CGCGCTCTCA AGGAACCGGG 
TTAGGTCTTG CTGTGGTTCA AATGGTTTGC CGTGCCCATG ACGGTCGATT AGAACTTATT 
TCAGAGCAGG GTGATGGAGC CTGCTTTACC ATGTGCATTC CGCTAGAGCG AGTGCAAGCA 
CATACTGGAG AATCATAA
 
Protein sequence
MDNNTNQSHL DSVENQVERY KQVLDVMPAG VILLDTHGVV REANPEAHRI LEIPLVDEKW 
FNIIQAVFDP REDDGHEVSL RNGRKVRLAI SASATGQLIL ITDLTETRLL QSRVSDLQRL 
SSLGRMVASL AHQVRTPLSS AMLYASNLAA PNLPPATKDR FQSKLMDRLH DLEKQVNDML 
LFAKGGDNRV IKPFNISQLV TEYQPMVETA LKNNNIDYFL EVEEEHTELL GNANAIASAL 
SNLVMNAIQM SGKESQIDVF FRPVNGELRI SVQDSGPGVP KELQAKIMEP FFTTRSQGTG 
LGLAVVQMVC RAHDGRLELI SEQGDGACFT MCIPLERVQA HTGES