Gene VIBHAR_03158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03158 
SymbolfliJ 
ID5553478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3186931 
End bp3187374 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID640908639 
Productflagellar biosynthesis chaperone 
Protein accessionYP_001446334 
Protein GI156975427 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2882] Flagellar biosynthesis chaperone 
TIGRFAM ID[TIGR02473] flagellar export protein FliJ 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACG CGATGGAATT CCTACTCGAG CAAGCAAAAG AACGCGAAGA CCAAGCGGTG 
TTGGCGCTCA ACAAAGCACG CTCAGAGCTG GATGATTACT ACCGCCAAGT AGAGCAAATT 
GAAAAGTACC GCTTAGATTA CTGCCAGCAG TTGGTAGACC GTGGTATGGC GGGACTCACC 
GCAAGCCAAT ACGGCCACTT AAACCGCTTT TTAACTCAGC TCGATGAAAC GCTTTCCAAG 
CAAAAACAGG CAGAAAACCA CTTCAAAGAG CAGGTGGTGA ACTGCCAAGA TTACTGGTTA 
AACATGCGTA AAGAACGTAT GTCTTACGAG TGGATGATTG AAAAGCGCGA GAAAGAAAAG 
CAAATGGCGG AAGCTAAGCG TGAACAAAAA CAAATGGATG AGTTTTCTAC CTTGCTTTAC 
AGCCGAAAAC CGCAACGTTT CTAA
 
Protein sequence
MNNAMEFLLE QAKEREDQAV LALNKARSEL DDYYRQVEQI EKYRLDYCQQ LVDRGMAGLT 
ASQYGHLNRF LTQLDETLSK QKQAENHFKE QVVNCQDYWL NMRKERMSYE WMIEKREKEK 
QMAEAKREQK QMDEFSTLLY SRKPQRF