Gene VIBHAR_03154 details

Gene Information

• Locus tag: VIBHAR_03154
• Symbol: fliM
• ID: 5553979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 3182728
• End bp: 3183774
• Gene Length: 1047 bp
• Protein Length: 348 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640908635
• Product: flagellar motor switch protein FliM
• Protein accession: YP_001446330
• Protein GI: 156975423
• COG category: [N] Cell motility
• COG ID: [COG1868] Flagellar motor switch protein
• TIGRFAM ID: [TIGR01397] flagellar motor switch protein FliM

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGATC TATTAAGCCA AGACGAGATT GATGCGCTAC TGCACGGGGT TGACGACGTT 
GATGACGTTG ATGAACCCAT GGATGCCGGC GACGAGAGTG CCGTCAGTTT CGACTTCTCG 
TCTCAAGACA GGATTGTCCG TGGTCGGATG CCGACGCTCG AACTTATCAA CGAGCGCTTT 
GCCCGACACA TGCGAATCAG CCTGTTTAAC ATGTTGCGTA AAACCGCTGA GGTGTCTATT 
AACGGCGTAC AGATGATGAA GTTTGGTGAA TACCAAAATA CGCTGTACGT ACCGACAAGT 
TTGAACATGG TGCGCTTCCG TCCACTAAAA GGCACGGCTC TGATCACCAT GGAAGCACGC 
TTAGTGTTTA TTCTGGTAGA GAACTTCTTT GGTGGCGATG GTCGTTTCCA CGCCAAAATT 
GAAGGTCGTG AATTTACCCC AACTGAGCGT CGCATTATCC AGCTTTTGCT GAAAATTGTT 
TTCGAAGACT ACAAAGAAGC GTGGTCGCCG GTGATGGGTG TGGAGTTCGA GTATCTCGAC 
TCCGAAGTAA ACCCAAGCAT GGCCAACATC GTGAGCCCAA CCGAAGTGAT TGTGGTGAGC 
TCATTCCACA TTGAAGTCGA TGGCGGTGGT GGTGATTTCC ACGTGGTCAT GCCGTACTCA 
ATGGTGGAAC CGATCCGTGA ATTGCTCGAT GCGGGTGTTC AATCTGACAA GATGGAAACC 
GACGTTCGTT GGAGCTCTGC ACTGCGTGAA GAGATCATGG ATTGCCCAGT TAACTTCCGC 
GTGAACTTGC TAGAGAAAGA CATTTCTCTG CGCGATTTGA TGGAGCTGCA ACCAGGCGAT 
GTCATCCCGA TTGAGATGCC TGAGCACGCG ACCATGTTCA TCGAAGATTT ACCGACTTAC 
CGCGTGAAGA TGGGTCGCTC CGAAGATAAG ATGGCGGTAC AAATCTCCGA AGAGATTGAA 
CGCCCTCACG TTGTAAAAAC AGATTTAGCG TTCTTGGGCA AAGACATCAT GTCTGAACTT 
GAGCACGACG ACGATAAAGA CGATTAA 

 

Protein sequence

MTDLLSQDEI DALLHGVDDV DDVDEPMDAG DESAVSFDFS SQDRIVRGRM PTLELINERF 
ARHMRISLFN MLRKTAEVSI NGVQMMKFGE YQNTLYVPTS LNMVRFRPLK GTALITMEAR 
LVFILVENFF GGDGRFHAKI EGREFTPTER RIIQLLLKIV FEDYKEAWSP VMGVEFEYLD 
SEVNPSMANI VSPTEVIVVS SFHIEVDGGG GDFHVVMPYS MVEPIRELLD AGVQSDKMET 
DVRWSSALRE EIMDCPVNFR VNLLEKDISL RDLMELQPGD VIPIEMPEHA TMFIEDLPTY 
RVKMGRSEDK MAVQISEEIE RPHVVKTDLA FLGKDIMSEL EHDDDKDD