| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03151 |
|---|
| Symbol | fliP |
|---|
| ID | 5554264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3180948 |
|---|
| End bp | 3181817 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640908632 |
|---|
| Product | flagellar biosynthesis protein FliP |
|---|
| Protein accession | YP_001446327 |
|---|
| Protein GI | 156975420 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
|---|
| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGG ATAACTCAAT CCGCCTGATG CTCAGCACCT TTGTGTTGCT GATTGGCGTA
CTGTTTTCTT CGTTTTCGTT TGCTCAAGCA GAGGAATCCG CGCTTCCTGC TAATCTGGCT
GAAGGCGACA GCGTGACAGT AAAAGCGATG GAGAACGAGT CGAGTTCCAG CCGCAGCATG
TCGGTGGGCA ATGGTGGAGG CATTCCCGCT TTCACCATGA CGACCAATGC CGATGGCAGC
GAAGACTACT CGGTCACGCT GCAAATTCTT GCGTTGATGA CCATGCTTGG CTTCTTGCCA
GCGATGGTGA TTTTGATGAC CTCATTCACT CGTATCGTGG TGGTAATGTC CATCTTGCGA
CAAGCAATGG GTCTGCAACA AACGCCTTCG AACCAAGTCA TCATTGGTAT TGCGCTCTTT
CTTACCTTCT TCGTGATGTC GCCGGTTCTG AATGAGATTA ATGACAACGC GATTCAGCCT
TATTTGAATG AGCAAGTGAC GGCGCGCCAA GCGTTCGATG CTGCGCAAGT TCCAATGAAA
GCCTTTATGC TTAAGCAGAC ACGAATCAAA GACCTAGAGA CCTTTGTGAA CATGTCTGGT
GAGCAGGTAA CGAACCCAGA AGATGTCTCT ATGGCAGTGT TGATTCCGGC ATTCATTACC
TCTGAGCTCA AGACCGCGTT CCAAATCGGT TTCATGTTGT TTCTGCCGTT TTTGATCATC
GACTTGGTTG TTGCCTCGGT GTTGATGGCG ATGGGTATGA TGATGCTTTC ACCAATGATC
GTATCACTGC CATTTAAGCT GATGCTGTTT GTGCTGGTGG ATGGTTGGAA TCTGATATTG
TCGACACTCG CCGGCAGTTT TGCCCTTTAG
|
|---|
| Protein sequence | MTKDNSIRLM LSTFVLLIGV LFSSFSFAQA EESALPANLA EGDSVTVKAM ENESSSSRSM
SVGNGGGIPA FTMTTNADGS EDYSVTLQIL ALMTMLGFLP AMVILMTSFT RIVVVMSILR
QAMGLQQTPS NQVIIGIALF LTFFVMSPVL NEINDNAIQP YLNEQVTARQ AFDAAQVPMK
AFMLKQTRIK DLETFVNMSG EQVTNPEDVS MAVLIPAFIT SELKTAFQIG FMLFLPFLII
DLVVASVLMA MGMMMLSPMI VSLPFKLMLF VLVDGWNLIL STLAGSFAL
|
|---|
| |