Gene VIBHAR_03135 details

Gene Information

• Locus tag: VIBHAR_03135
• ID: 5554140
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 3164750
• End bp: 3165367
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640908616
• Product: cytochrome c biogenesis protein CcmA
• Protein accession: YP_001446311
• Protein GI: 156975404
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component
• TIGRFAM ID: [TIGR01189] heme ABC exporter, ATP-binding protein CcmA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGAAG TCTCTAACCT AACTGCGATC CGTGATGACC GGGTCCTGTT TGAAAACCTG 
CAATTCGAAA TCAAGCCTGG TGAGTTGGTC CAGATTGAGG GACGTAACGG TACAGGTAAA 
ACCACATTAT TGCGTATCGT GACAGGGTTA GGAGACAGAG AAGAAGGCAT CATCAAATGG 
AAGGGTGAAG AGGTTGAGAA ATCTCGCGAC GTATTCCATC AAGACTTGCT GTTCTTAGGG 
CATCAAACTG GCGTTAAACG CGAACTGACC GCATTAGAAA ACCTGCGCTT TTACCAATCT 
ATCCACAATA ATCGCTCCTC TGAAGAAGAA ATCTTTGCCG CACTTGCCCA AGTGGGGCTT 
GCAGGCCGAG AAGATGTGCC TGTAGCACAA CTTTCTGCAG GCCAGCAACG TCGCGTGGCT 
TTGGCAAGGC TTTGGTTAAG CAATCAAATC TTGTGGATTC TGGACGAACC TCTTACTGCC 
ATCGACAAAC AAGGTGTCAA AGTTCTGGAG TCGTTGTTTG CCAGTCATGC AGATAATGGC 
GGCATTGTTG TACTTACTAC ACACCAAGAT ATGTTTGCAG ACAGCCCGAA ACTTAGAAAA 
ATAAAACTGG GTGACTGA 

 

Protein sequence

MLEVSNLTAI RDDRVLFENL QFEIKPGELV QIEGRNGTGK TTLLRIVTGL GDREEGIIKW 
KGEEVEKSRD VFHQDLLFLG HQTGVKRELT ALENLRFYQS IHNNRSSEEE IFAALAQVGL 
AGREDVPVAQ LSAGQQRRVA LARLWLSNQI LWILDEPLTA IDKQGVKVLE SLFASHADNG 
GIVVLTTHQD MFADSPKLRK IKLGD