| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03134 |
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| Symbol | |
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| ID | 5553710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3164080 |
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| End bp | 3164748 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640908615 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446310 |
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| Protein GI | 156975403 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTCGG CCATGACAAC CATTATCCGC CGTGAGCTTC TGATCGCATT TCGCCGTCAA
GCGGACATCT TGAACCCGTT GTGGTTCTTC ATCATCGTGA TCACACTTTT TCCTCTCAGC
ATCGGTCCCG AGCCTAATTT GTTAGCACGT ATTGCAGCTG GCATTGTTTG GGTTGCTGCG
CTGCTGTCTG CCTTATTATC ATTAGAGCGT TTATTCCGTG ATGATTATCA AGACGGCGCA
CTTGAACAAA TGATGCTAAT GCCAATTCCA TTGCAACTTG TTGTGATTTC AAAGGTCATA
GCTCACTGGT TGCTGACGGG ATTGCCTCTG ATTTTGATCA GTCCATTGTT GGCGATTCTG
CTTTCTCTTG ATTTCAATAC TTGGTTGTCT GTAGTGCTGA CACTTGCTAT CGGTACCCCG
ACGCTGAGTT TTATCGGTGC CATTGGCGTG GCACTGACGG TTGGGTTGCA AAAAGGCGGC
GTTCTTTTGA GTTTGCTCAT TCTTCCGCTC TACATCCCGA TTCTGATTTT CGCTACGTCC
GCGATTGATG CTGCGGCATT AGGTATGTCG TATAACGGAC AACTGGCAAT TTTAGGCGCA
ATGCTGATGG GGGCGATGAC CCTCACGCCA TTCGCCATAA GCGCAGCCTT GCGAGTTAGT
GTTAACTAA
|
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| Protein sequence | MISAMTTIIR RELLIAFRRQ ADILNPLWFF IIVITLFPLS IGPEPNLLAR IAAGIVWVAA
LLSALLSLER LFRDDYQDGA LEQMMLMPIP LQLVVISKVI AHWLLTGLPL ILISPLLAIL
LSLDFNTWLS VVLTLAIGTP TLSFIGAIGV ALTVGLQKGG VLLSLLILPL YIPILIFATS
AIDAAALGMS YNGQLAILGA MLMGAMTLTP FAISAALRVS VN
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