Gene VIBHAR_03124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03124 
Symbol 
ID5553742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3154361 
End bp3155623 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content43% 
IMG OID640908605 
Producthypothetical protein 
Protein accessionYP_001446300 
Protein GI156975393 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGA ATACGCGTCT GTTTAAAAAG ACTCTCCTAG CAGTGACGGT TGCAATGGCA 
TCAGGTCAAG CAATGGCAGC TGGTTTCCAG CTAAACGCAC AATCAGCGAC TGGTATCGGT
CGTGCATTCG CAGGTGATGC GGTAATTGCA GATAACGCAT CTGTAATGGC TCGTAACCCA
GCAGCAATGG CTCTATTTGA CAAAATGGAA CTGTCGCTAG GTTTTGAAAG CATTACTTCG
CTTATTGAAG TGAAAGATGT GAAGTACTCG GGCTCAATGA CTGGCCCTCA TGATGTAGCA
AACACTGATG ATGTTGGTGA TACATCAATA GCGCCAAACA TCCACCTCAT TGTCCCTGTT
AATGAAAAAT TTGCTTGGGG TGTGAATGCT TACTCAAACT TCGGTACTAA AACAGAGTTT
TCTGACAACT ATGTTGCAGC TGAATATGGT GGTCTAACTG ATGTTAAAAG CTTTAACCTT
GGTGTAGCTG GCTCATATCG CCTGAACGAG CAATGGAGCT TTGGTGCAGG TCTAGACCTA
ATTTATGGTC AAGGTACAAT GAAACGTGTT GCTGGTCAGA GTTTTCCTCC AATTCCAGGC
CTACAACCAG GTTCAACATT GCTAGATGTT GATAAAGCTG ATGGTTTTGC TGTTGGTTTC
AATGTAGGTA CTGTATTTGA ACTAGATGAA AACAACCGTT TTGGTTTGTC TTACCGTTAC
AGCCCAGAAT TTGAAGCTAA AGACGACAAA GGCCAAAAAA TTGTTCTGCC TCTACCCGAT
ATGGCTGAAT TCTCTGGTTA CCATAAAATC GAAGATACCA AATTCGCAGT ACACTACTCA
ATCCAATACA TTGGTTGGGG TGCATTTGAC CAAATTGAGT TTAAAAACCT TAAAGACTCG
CTTCTTGTAG GTAGTTACAA TAAAGATTAC CAATGGCAAG ATGGTTGGCA CTACTCAATC
GGCGGTACAT ACTACCTAAA CAACGATTGG ACTCTACGCG CAGGTTACAT GTACGACACA
AGTGCACAAG ATCAAGTAAC ATCAATTTCT GTACCTGACT CTGATCGTCA ATGGCTATCT
GCAGGCTTCA CCTACCATAT CGATAACAAA TCGAATGTTG ACTTTGGTTT CACCTACCTA
ATGGGTGATG ACGTTTCAGT AAATGAAGAG ACCACAGTTA ATGGTTTCCC TGTGAGTAGT
ATTTCTGCTA CGACGCATGC AGACGCGATT CTATTCGGCT TACAGTACAG CCGCAGCTTC
TAA
 
Protein sequence
MTQNTRLFKK TLLAVTVAMA SGQAMAAGFQ LNAQSATGIG RAFAGDAVIA DNASVMARNP 
AAMALFDKME LSLGFESITS LIEVKDVKYS GSMTGPHDVA NTDDVGDTSI APNIHLIVPV
NEKFAWGVNA YSNFGTKTEF SDNYVAAEYG GLTDVKSFNL GVAGSYRLNE QWSFGAGLDL
IYGQGTMKRV AGQSFPPIPG LQPGSTLLDV DKADGFAVGF NVGTVFELDE NNRFGLSYRY
SPEFEAKDDK GQKIVLPLPD MAEFSGYHKI EDTKFAVHYS IQYIGWGAFD QIEFKNLKDS
LLVGSYNKDY QWQDGWHYSI GGTYYLNNDW TLRAGYMYDT SAQDQVTSIS VPDSDRQWLS
AGFTYHIDNK SNVDFGFTYL MGDDVSVNEE TTVNGFPVSS ISATTHADAI LFGLQYSRSF