| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03122 |
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| Symbol | |
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| ID | 5556401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 3152742 |
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| End bp | 3153335 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640908603 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001446298 |
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| Protein GI | 156975391 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTCAC AGAGCAAGAC GGAGGCTCCT GTGGCAATAT TTAAAATGTT TGGAAAGAAA
AATTCCAACA GTCCGGTCAA CTCTGATATG GACAGACAAA GAAAATACGA AGCTCTTGTA
CGGGGCTATC ACAGAGATTT GTATCGCTAC GCTTACTGGT TATGCAAAGA CAAGGCAATT
GCAGAAGATT TGGTTCAAGA GACCTGTCTG CGCGCATGGA AGTCACTGGA TAGTCTTCAA
GATGAAAAGG CCGCGAAATC TTGGCTTATT ACTATATTAA GACGAGAAAA CGCACGCCGC
TTTGAACGTA AACAATTTGA TTTGGTTGAT ATCGATGACT ATGGCAATGA TGCTAAAGTC
AGCGATGACC CACATCATCA ACAGGAATGG CTTCAAGCTC AAATCATGAA GCTTGATGTT
GAATACCGTG AACCTTTGTT TCTTCAAGTT GTAGGCGGTT TCAGTGGAGA AGAAATCGGC
AGCATTCTTG ATCTAAACAA GAACACGGTA ATGACACGCC TATTCCGTGC ACGTAATAAA
TTAAAAGAGA TGTTGGATTC TCAAGATACT CAGAGAGGAC AAAAAAATGG ATGA
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| Protein sequence | MTSQSKTEAP VAIFKMFGKK NSNSPVNSDM DRQRKYEALV RGYHRDLYRY AYWLCKDKAI
AEDLVQETCL RAWKSLDSLQ DEKAAKSWLI TILRRENARR FERKQFDLVD IDDYGNDAKV
SDDPHHQQEW LQAQIMKLDV EYREPLFLQV VGGFSGEEIG SILDLNKNTV MTRLFRARNK
LKEMLDSQDT QRGQKNG
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