Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03120 |
Symbol | fadJ |
ID | 5553806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3148708 |
End bp | 3150822 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640908601 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_001446296 |
Protein GI | 156975389 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC AAAAAGCATT TAGTCTAAAG ATTGATGAGC AGAACATTGC TTGGCTAGCC ATCGATGTGC CAAATGAGAA AATGAACACG CTGCAAGCGG CATTTGCAGA TGAGATGAAA GAAATTTTCG CTCAACTGAA AGACACCAGC GGCGTGAAAG GGATGGTCAT TCATTCCCTA AAACCAGATA ACTTTGTTGC GGGCGCCGAC GTTCGTATGC TTGAAGCGTG CACAACGGCG AGTGAAGCGG AAGCATTGGC TAAGCAAGGT CAAGAGTTAT TCCAGCAGCT ATCTGATCTG CCTTACCCAG TTGTTGCTGC GATTCACGGC CCATGTCTAG GTGGTGGTTT AGAGCTTGCG CTAGCGTGTG ATTACCGCGT ATGTACTGAT TCCGATAAAA CGCGTCTTGG TTTGCCTGAA GTGCAACTTG GTTTGTTGCC TGGTTCTGGT GGTACTCAAC GTCTTCCGCG TTTGATTGGT CTATTACCTT CGCTGGATTT AATCCTTACA GGCAAACAAC TGCGTGCAAA GAAAGCGAAA AAGTTGGGTG TGGTTGACGC ATGTGTGCCA GAGACTGTCT TACTCGATAT CGCGAAGATG CATGTCGAAA AAGGCAAGAA GAAAGGTAAA CAAAAGCAAT CGACAAAAGA GAAGTTGATG TCGGGTAGTG GTTTAGGTCG TAAGTTTGTG TTTGAGCAAG CCGCGAAGAA AACCAATGAA AAGACCCGTG GTAACTACCC TGCAACGGTC GCGATTCTAG AAGTGATCCA GCATGGTCTT GAAAAGGGCT TTGCCCAAGG TCAAGAACTT GAAGCGAAGC GCTTTGGCGA ATTGGTGATG AGTTCAGAAT CTAAAGCACT GCGTTCTATT TTCTTTGCTA CTACAGAAAT GAAGAAAGAA AACGGCGCAG AAGCTGAGCC AACTGCAGTC AACAAAGTTG GCGTGTTAGG TGGCGGTCTA ATGGGGGCTG GCATTAGCCA TGTTTCTGTT GCGAAAGCGA AAGTGCCAGT ACGTATTAAA GATGTCAGCA ATGATGGTGT GCTTAACGCG TTAAACTACA ACTACAAGTT GTTCGAAAAG CAGCGTAAGC GCCGCATTAT CTCGAAAGCG GGTCTGCAAT CTAAAATGCT GCAACTTTCG GGTGGTATTG ATTTTACAAG CTTCAATCAT ATTGATGTGG TTATCGAAGC TGTATTTGAA GATCTTGACC TTAAACAGGC GATGGTTGCA GATATTGAAG CGAACGCGAA ACCAGAGACT ATCTTTGCGA CCAACACGTC TTCGTTACCA ATTCACAAAA TTGCAGAAAA AGCAGAGCGT CCAGAAAACA TCGTCGGTCT GCATTACTTC AGCCCAGTAG AGAAAATGCC ACTGGTGGAA GTGATTCCTC ATGAAACTAC GTCAGAAGAG ACCATTTCTA CCGTTGTTGC ACTAGCGAAG AAGCAGGGCA AGACACCAAT CGTAGTGAAA GATAAAGCGG GCTTCTATGT AAACCGCATT CTTGCGCCTT ACATGAACGA AGCTGCGCAC ATCTTGCTGG CAAATGAGCC AATCGAACAA CTTGATGGAG CGCTGCTTGA CTTCGGTTTC CCAGTAGGTC CTATCACCTT GTTGGATGAA GTCGGTGTGG ATATCGGTGC TAAAATCATG CCGATCTTGG TTAACGAATT GGGCGAGCGA TTCAAAGGTC CAGACGTATT CGATACACTA CTGAACGATG GCCGCAAAGG TCGTAAGACT GGTAAAGGCT TCTATACCTA CAAAGGTAAG AAGAAAGAAG TCGATAAGTC AGTTTACAAG CTATTGAACC TGACGCCAGA ATCCAAGCTA AGCGACAATG ACATTGCACT ACGTTGTGTG CTACCAATGC TAAACGAGGC GGTTCGCTGT TTAGATGACG GTATTATCCG TTCTCCACGC GATGGTGATA TCGGTGCGAT CTTTGGTATA GGCTTCCCAC CATTCTTAGG TGGTCCATTC TGTTACATGG ATCAATTCGG TTTGAAAGAA CTGGTTGAGA AAATGAACGA GTTTGCATCG AAATACGGTG ATCGTTACGC GCCGTGTGAT GGATTACTCA CTCGTGCGGG TGAAGGTCGT AACTTCTACG ATTAA
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Protein sequence | MSEQKAFSLK IDEQNIAWLA IDVPNEKMNT LQAAFADEMK EIFAQLKDTS GVKGMVIHSL KPDNFVAGAD VRMLEACTTA SEAEALAKQG QELFQQLSDL PYPVVAAIHG PCLGGGLELA LACDYRVCTD SDKTRLGLPE VQLGLLPGSG GTQRLPRLIG LLPSLDLILT GKQLRAKKAK KLGVVDACVP ETVLLDIAKM HVEKGKKKGK QKQSTKEKLM SGSGLGRKFV FEQAAKKTNE KTRGNYPATV AILEVIQHGL EKGFAQGQEL EAKRFGELVM SSESKALRSI FFATTEMKKE NGAEAEPTAV NKVGVLGGGL MGAGISHVSV AKAKVPVRIK DVSNDGVLNA LNYNYKLFEK QRKRRIISKA GLQSKMLQLS GGIDFTSFNH IDVVIEAVFE DLDLKQAMVA DIEANAKPET IFATNTSSLP IHKIAEKAER PENIVGLHYF SPVEKMPLVE VIPHETTSEE TISTVVALAK KQGKTPIVVK DKAGFYVNRI LAPYMNEAAH ILLANEPIEQ LDGALLDFGF PVGPITLLDE VGVDIGAKIM PILVNELGER FKGPDVFDTL LNDGRKGRKT GKGFYTYKGK KKEVDKSVYK LLNLTPESKL SDNDIALRCV LPMLNEAVRC LDDGIIRSPR DGDIGAIFGI GFPPFLGGPF CYMDQFGLKE LVEKMNEFAS KYGDRYAPCD GLLTRAGEGR NFYD
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