Gene VIBHAR_03115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03115 
Symbol 
ID5554159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3141501 
End bp3142433 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content48% 
IMG OID640908596 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_001446291 
Protein GI156975384 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAAGA TTTTTGTAGA AGAGGCGGTA TCGGAGCTCC ATACCCTTCA AGATATGATT 
CGTTGGACGC TAAGCCGCTT TAACGCCGCT AACCTGTTTT ACGGTCATGG CACTGATAAT 
GCGTGGGATG AAGCGGTTCA GCTTATCCTG CCAACATTAT ACTTGCCGAT TGATGTGCCT 
CCGCACGTAT TGAACTCTCG CCTAACGACA AGCGAGCGTC TGCGTATTGT TGAGCGTGTA 
GTAAAACGCA TCAACGAGCG TACACCAACT GCATACCTAA CCAACAAAGC ATGGTTCTGC 
GGTCTTGAGT TCTTCGTTGA TGAGCGTGTA CTTGTGCCAC GTTCTCCAAT CGGCGAATTG 
ATTCAGGCGG AATTCCAACC TTGGTTGGTG GAAGAGCCTA CGCGCATTAT GGACCTATGT 
ACGGGTTCTG GCTGTATCGC AATTGCTTGT GCACACGCAT TCCCTGAAGC AGAAGTTGAC 
GCGATCGACA TCTCTACAGA CGCTCTACAA GTGGCTGAGC AAAACGTACA AGATCACGGC 
ATGGAGCAGC AAGTATTCCC AATTCGCTCT GACTTGTTCC GCGACCTTTC AAAAGAGAAG 
TACAACCTGA TCGTGTCTAA CCCACCTTAC GTGGACGAAG AAGACATGAA CAGCCTACCA 
GACGAGTTCA CGCACGAGCC TGAACTAGGT CTTGCTGCAG GTACTGACGG TCTAAAACTG 
GTTCGTCGTA TTCTTGCTAA CGCACCAGAC TACCTAACAG ACGATGGTAT TCTTGTATGT 
GAAGTCGGTA ACTCAATGGT TCACATGATG GAACAGTACC CACAAATTCC ATTCACTTGG 
ATTGAGTTCG AGAACGGTGG TCACGGCGTA TTCATGCTAA CGCGTGACCA GCTGGTTGAG 
TGTGCAGAAG AGTTTAAACT GTACAAAGAC TAA
 
Protein sequence
MDKIFVEEAV SELHTLQDMI RWTLSRFNAA NLFYGHGTDN AWDEAVQLIL PTLYLPIDVP 
PHVLNSRLTT SERLRIVERV VKRINERTPT AYLTNKAWFC GLEFFVDERV LVPRSPIGEL 
IQAEFQPWLV EEPTRIMDLC TGSGCIAIAC AHAFPEAEVD AIDISTDALQ VAEQNVQDHG 
MEQQVFPIRS DLFRDLSKEK YNLIVSNPPY VDEEDMNSLP DEFTHEPELG LAAGTDGLKL 
VRRILANAPD YLTDDGILVC EVGNSMVHMM EQYPQIPFTW IEFENGGHGV FMLTRDQLVE 
CAEEFKLYKD