| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03101 |
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| Symbol | truA |
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| ID | 5555126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3123041 |
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| End bp | 3123835 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640908582 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001446277 |
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| Protein GI | 156975370 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATCG CATTAGGTAT CGAATACAAC GGTACAAACT ACTTTGGTTG GCAACGCCAA
AGAGAAGTGA AAAGTGTCCA AGAAGAGCTA GAAAAAGCAT TGTCCGTGGT CGCGAATCAT
CCTGTCGAAG TACAGTGTGC GGGTCGTACC GATGCTGGCG TACATGGCAC TGGTCAAGTC
GTTCACTTTG ACACCAACGT GAGTCGTAAA ATGGTGGCTT GGACCATGGG CGCAAACGCG
AACATGCCAA GTGATATCGC TGTCCGCTGG GCAGTGGAAG TGAACGATGA TTTCCATGCT
CGATTCTCAG CAACCGCACG TCGTTACCGC TACATTATTT TCAACCACGC ACTGCGCCCA
GGTATTTTGA ACTCTGGTGT GAGCCACTAC CATGGTGAAC TCGATGAGAA GAAGATGCAT
GAAGCAGGGC AGTATCTACT GGGTGAGAAT GACTTTAGTT CATTCCGTGC GGCACATTGC
CAATCATTAA GCCCATGCAG AAACATGATG CACTTGAACG TGACTCGTCA TGGTGATTAC
ATCGTGATTG ATATTAAAGC GAACGCTTTT GTACACCATA TGGTGCGCAA CATTACCGGT
AGTCTCATTA AAGTGGGTCG AGGCGAAGAA AAGCCAGAGT GGATCAAGTC ACTTTTAGAA
GCGAAAGATC GCAAATTAGC AGGCGCAACG GCCAAAGCTG AGGGCCTATA TTTGGTGGAT
GTGGACTACC CAGAAGAGTT CGGATTACCA CGTGTGCCGA TCGGTCCGTT ATTTTTGCCC
GATAATTTGA ACTAA
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| Protein sequence | MRIALGIEYN GTNYFGWQRQ REVKSVQEEL EKALSVVANH PVEVQCAGRT DAGVHGTGQV
VHFDTNVSRK MVAWTMGANA NMPSDIAVRW AVEVNDDFHA RFSATARRYR YIIFNHALRP
GILNSGVSHY HGELDEKKMH EAGQYLLGEN DFSSFRAAHC QSLSPCRNMM HLNVTRHGDY
IVIDIKANAF VHHMVRNITG SLIKVGRGEE KPEWIKSLLE AKDRKLAGAT AKAEGLYLVD
VDYPEEFGLP RVPIGPLFLP DNLN
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