Gene VIBHAR_03084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03084 
Symbol 
ID5553634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3108599 
End bp3109297 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content48% 
IMG OID640908565 
Productaquaporin Z 
Protein accessionYP_001446260 
Protein GI156975353 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT ACATGGCAGA GGTTTTTGGT ACTTTTTGGT TAGTACTTGG TGGTTGTGGT 
AGTGCAGTAT TGGCTGCTGG CTTCCCAGAT GTAGGCATTG GTCTACTGGG CGTTTCTCTT
GCTTTCGGTC TAACCGTTCT TACTATGGCA TTTGCAATTG GCCATATCTC AGGTTGTCAC
CTAAACCCAG CAGTCACCAT CGGTTTGTGG GCCGGCGGTC GCTTTGATAC TAAAGACGTT
GTACCTTACA TCATCGCGCA AGTGATTGGT GGTGTGATTG CAGGTGGCAT ACTTTACGTG
ATCGCAACCG GTCAAGCGGG CTTTGACGTG GTTGGTTCTG GCTTTGCCGC GAACGGTTAC
GGCGCGCATT CTCCAGGCCA ATATTCAATG GTTGCGGCTT TAGTGACTGA AGTTGTGATG
ACGATGATGT TCCTTATCGT GATCATGGGT GCGACAGACA AACGTGCACC ACAAGGCTTT
GCACCTATCG CTATCGGTCT ATGTTTGACA CTGATTCACC TAATCAGCAT CCCTGTGACA
AACACATCGG TTAACCCAGC GCGTAGTACT GGCGTTGCGG TATTTGTTGG CGACTGGGCT
GTTTCTCAGC TTTGGCTATT CTGGGTAGCA CCAATCGTTG GTGGTATTCT AGGTGCACTT
ATCTACAAAA ATCTACTTGG TACAGAATCA AACGATTAA
 
Protein sequence
MNKYMAEVFG TFWLVLGGCG SAVLAAGFPD VGIGLLGVSL AFGLTVLTMA FAIGHISGCH 
LNPAVTIGLW AGGRFDTKDV VPYIIAQVIG GVIAGGILYV IATGQAGFDV VGSGFAANGY
GAHSPGQYSM VAALVTEVVM TMMFLIVIMG ATDKRAPQGF APIAIGLCLT LIHLISIPVT
NTSVNPARST GVAVFVGDWA VSQLWLFWVA PIVGGILGAL IYKNLLGTES ND