Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03070 |
Symbol | |
ID | 5553549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3091926 |
End bp | 3096311 |
Gene Length | 4386 bp |
Protein Length | 1461 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908552 |
Product | hypothetical protein |
Protein accession | YP_001446247 |
Protein GI | 156975340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATCAA CCATCGGCGC TAATGGGCTG AGTATTGTAC ATAAAGGCTC AGGCGGTGAA GCGAACGCTT CTGTGCCGGA CGTTTGTTTA ACCAAAGTCG GAAAGCCTGT TGTTCCTATT CCGTACGGCA ATAACGCTAA ATCCGCCGAT TTGGTGGACG GCTCAACCAG TGTCACTGCC GATGGTGGCA ACAGTATTGC CTTGCAAGGC AGTAAGTTCT CAAAAAGTAC AGGTGATGCC GCTGGCGATA AAAAAGGCGT GAGTTCAGGA ACCATTGAAG GAGAAGCGCA GTTTGTGACG TCTTCTCCGA ATGTCCTTAT CGAAGGAAAA GGAGTGGCAC GCCAAAGTGA TCAAATGACC ATGAACAATG GCAACACCAT GTGTTTTGGC GTACAGAACC CATCTTTCTC GGTCGAAGAA GATCTTGAAG AGACCTTTAT CATGGACGTT TGCGTGCGTC ACCCAAACGG TCAACGGCTG GTGAATGCGC CATTTAAACT CAGTGATGAG CAAGGTTCGA CGGTATATGA AGCCACTTTG GATGATAAAG GGCGCAGTGA TGCCGACCCG CTCAAAGGTG GCAAGGTCAA ACTGCTGGTC GAAGAGAGTC AAGACCCGTT TGTGGTGGCT CCGATTCGTC GCGATAACCC TCGCCATCTA GACAGCCAAT CGGATGATGA TTTTTTCAAT ATCGCTTCCA AAGGTCAGCG CGGCTTTTGG CAGCCAACCA GAATTGAGAC CGTTGGCACG GCTTGGGGCA GTATTGGGCA AACGTTGAGT AGCGATCGTT ATTTCCAAGA CATGGTCAGT GCTGAGGTCA TTCAGCACTT TACCCATTAT CACCCTGATA CAACATTCGA TGTATCAAAG ACCTGTGAGG CTCTTATTGG CAACCTTGAT CAACCCTTGC CGCATACCAC TGAATCGCTG CTCGCTTACA CCCTGCCTCA AGTTCTAGAA GAAGGAGAAC TACTGTCGGT ACTGCTGAGG CTAGCCCCGC ATGAGACCAC CGACCGAATG CTGGCGTACA TGCGTGCGCG AGGTAAAGGC AACCCACAAA CCTATTTGGC TGACTACGAT TGGCAAGCGG CAGAAAAGAG CATCAATAGT GAACTCGACG CGCTGCTTAA CAAGCTGAAA AGTCGGTTAA CCTTCTTACG TGATGAAGCC AGCAAACTGC AATACGCGTA CCTGTCTGAG GATGTGTTCG ATAAGCACAT CGATACGTTA AGCTCGTACA TGAAGCTACT ACCCGACCTC ATTTCAGGTG TCTTCAGTAA AATGCAAACC AAAGCCAGCG AGCTTCTGGC GAACACAGAT GACGTAAAGG TCATCAAAGC GGCAGACGAC TTACACTCGA TTGAGAGTGA ATCGATTGAA GCCGTTGTCA ACACCACGAA AACCATCGAC ACGGTCGAGC CATTTATGAA CGAAGTGGCT GGTGTGATTG AGAATGTCAT TCCGATTTAT CCGGTGCGTT ATGGCTACGC GAATTTCTTT GACGAATTGA TGCCAGCGCA AGCCCCGCCA AGCATGTTAG AAATGAATGG TGCTACCGGG CTGAAAGACA CCGGTGGCTA CCTGCTTCGC CTTCTACGTG AGGGTTGGTT GTACATCAAA GAAGAGAGCG AAGAAGAGAC CGCGCCTTTC CACATCTTCA AATACGCGCA AACCCAAACG CCGACCGGTG TGATTGAAAA GTTTGAGAAA TACTATTTCA CCAATGAAGA AAACGCTCAA GAGGGATTAA CACTCGATAC CTCATCGGGT TCCACGTTCT ATCCTTTTGC GTTTGTGACG CCGAAAGCGA AAAAAATCTC CATCGCTTAC TCTGAGCACG AATGGTCTGC CGCCATCATT GATAACATGA ACGGCGATGA AGAGTTGCGT AAAAAAGCGA TGCAGCAGGT GGACTTGAGT ACGCCGCAAA CCGAGTTTAG CCAAGCGGCA ACGCAAGACA ACCTCAGCAC CTTGGTGGAA GATTACCGCA ATAACGATGA AAAGTGGTTG GCAGACAAAG ACAGCGCGAA ACCTATGGCA CACGGGCTTG ATCTCGCCAC TACCACACTA AGTTATCACC TTACGACTGA AGGCATTGTA GAAACCATGC AAAAAAGCCA TAGCGAGCAT AAAGACGGCA CATTGGTGGC TTTGTTTGAC CCAGTTGGTC GTCAACGTGA TATCTCAAAA GTTATCTCGA AAAATGTCGC TGAGCAACAA GCCTATGTCA ATGTCAACAA ATACCCTTTG ACGATTGGTC AGTACGCACA GTCATGTCTT GAGAGTGATA TTCCAGAAAT CAAGAAAGCT GCGGAGGAAA ACCTTGATAC GGAAAGGCTC TCAATATTTT TGACAGATTA TCAAGATGAA ATCAGCAAGA AAAAGAAAGA ACGCAAGCAG TTACTTGAAT TGATGGACTA CTTTGTTGCG GGTCAAGGCG CTGAAGATGA GGTTGGCTCG CTTACTTGCT ATCTAAGACA CTACTTTGAT ATTCGTCAGC AAGGCATTAT CGACCCTGCT GCTGAGATGG GGAAATTGCT GCTCCTTCTT GGATCGCTTT TTGAAGGCGT AACCGCAAGC GAAGAAGGCA TTGAAGACAT GGATAGATGG GTTGGTGAAG CCTTTCATAC AGAAGAACTC ACCCCATTAG ATAAGGTGTG GGGAGTTTCT TTAAAGGCCA TTCAGATCGT ATTTCTTCAG CCTCAAGATC AAATAAATTG GCATCATGCT GTTCCTCCTG TATTAACTTC GATAGGTAAT TACTTGGCTC GTATACAAGC TGAGTTCACT TATGGCACTA AGTTACTGGG AAATTCTGGG TTAGAGTGCT TTTATAGAGC AACCTTACCA TCATTATTTG ATGCCTTATT AGGGGTTCGG TTTACGGGGA ATCGACTCAA CATGGCGCTC GATGACATCG AAAACTTAAT CGATAAACAA ACAGGTCAAA AAAGCTCAAT CAAATCAAAC GTGCACTTTG GCGAAAAGCT GCTCAATTGG TCTGAAATGA AAGCAAACCA ATCAGAGCAA CGTATTTTTG AATTACTGGA AGCAGAGCCA ACAGCATCAG CGCCTGAATG GCTCAAAAGG CTGGCCGATA AGCTCCCTAC CAAAACACTT CTCCATTTCG CACAAGAAAG TGCAGGTTTA GGGCTGACCT ATTGGTCGTA TCAAGCAAAT GTGAATACCA TCAATGATCT TTTGTCTCAA ACACAATTCG ATACACTCGA CCCCGTGAAT GATGACAAAG AATATACATA TCGCACGGTA AAAATGTTGT CCACGCTCGC GGCGATCACC GCAGACAGTA TTACTCTCAG CCAGTACAGT GCCAAGGGAG TAAATATTGC AGCACGTGAA GCTGAAAGGG CGCTTCTTGC CCTTCAAAAG CAGTTACCGA ATATGAGTAA GCAGTTAGCT GAAAAGCTCG GAGTGCGCAG TTTACAAGCT TACAGTCAGC GTCTAGATAC GCGCCTGACA GCAGCGCCGA TAAAAGGACT TGTTGTCGGT GCAAACGTGG CAATGTCATT TGTTTACTTC TGGGATGCCT TTACTAGTCG CAGGTCAGGC AATAAACAAG CTTATCTGGG CTATCGGATC GGTGGCGTCT CCAGTCTATT GGTTGCACTT TCGGCCATCG GGGGGCCGGT TGGAGCCGTA TTACTCGCCG TTGGTCTTAC GGGGCTTTTA TTTAGTGCAT ATCAGATTGG CCGATATGGA AAAAATAGTT TCGAAAACTT GCTCTACAGC TCTTTCTGGG GGACCAGTAA GTATTATCCG TTTTGGAGTG ATTTTAAAAA ACAAGAAGAC ATTGATACTG TTCAAGAGAG GATAGATGTT ATCACCGATG TGGTATCTAA TAACAACAAG GCTGTGACAT CTGATAACAT TAAGTACTTT GATGCGGCAT TGAACATCGA GTCTCAGGAG TTTTTAAACT ATTTTTACGC ACCAAAACTC ACTATTGTGG ACAGCAGTAT TCGTCCATAT GGCTCAGAGC CATATCGATA CAATCTCAGT TACGTATTCG TCTTGCCGGA TTTTAAAATG AACGTATCTC AACTGCATGG TTCGATTTAT CGTGAATTGG ATGACGCTAA ATACGCGGCT TACTCAGTAC CTGAGCCCGA TAAGGCCATG ACCGAAACCT TCAGGAGTGC GTTGGCGGCG GCATTTGAAG ATAGGACGTT ATGTATCGCC AAAGAAGACG GTCTGCATGT CACGGTCAAT GTCGAGTTTT CGCACCCAGC TCGCCTGATC TGGTGTTACG AACCGACACC AAACACTGTT GTACCAAAAC GCTATTTAAC CAACAGCGGC TACATAAGCA CGAGTCAAAT AGGCATGCTT GATGAAAAAC CAAACACTAC ACCTTGGGGA AAATAA
|
Protein sequence | MASTIGANGL SIVHKGSGGE ANASVPDVCL TKVGKPVVPI PYGNNAKSAD LVDGSTSVTA DGGNSIALQG SKFSKSTGDA AGDKKGVSSG TIEGEAQFVT SSPNVLIEGK GVARQSDQMT MNNGNTMCFG VQNPSFSVEE DLEETFIMDV CVRHPNGQRL VNAPFKLSDE QGSTVYEATL DDKGRSDADP LKGGKVKLLV EESQDPFVVA PIRRDNPRHL DSQSDDDFFN IASKGQRGFW QPTRIETVGT AWGSIGQTLS SDRYFQDMVS AEVIQHFTHY HPDTTFDVSK TCEALIGNLD QPLPHTTESL LAYTLPQVLE EGELLSVLLR LAPHETTDRM LAYMRARGKG NPQTYLADYD WQAAEKSINS ELDALLNKLK SRLTFLRDEA SKLQYAYLSE DVFDKHIDTL SSYMKLLPDL ISGVFSKMQT KASELLANTD DVKVIKAADD LHSIESESIE AVVNTTKTID TVEPFMNEVA GVIENVIPIY PVRYGYANFF DELMPAQAPP SMLEMNGATG LKDTGGYLLR LLREGWLYIK EESEEETAPF HIFKYAQTQT PTGVIEKFEK YYFTNEENAQ EGLTLDTSSG STFYPFAFVT PKAKKISIAY SEHEWSAAII DNMNGDEELR KKAMQQVDLS TPQTEFSQAA TQDNLSTLVE DYRNNDEKWL ADKDSAKPMA HGLDLATTTL SYHLTTEGIV ETMQKSHSEH KDGTLVALFD PVGRQRDISK VISKNVAEQQ AYVNVNKYPL TIGQYAQSCL ESDIPEIKKA AEENLDTERL SIFLTDYQDE ISKKKKERKQ LLELMDYFVA GQGAEDEVGS LTCYLRHYFD IRQQGIIDPA AEMGKLLLLL GSLFEGVTAS EEGIEDMDRW VGEAFHTEEL TPLDKVWGVS LKAIQIVFLQ PQDQINWHHA VPPVLTSIGN YLARIQAEFT YGTKLLGNSG LECFYRATLP SLFDALLGVR FTGNRLNMAL DDIENLIDKQ TGQKSSIKSN VHFGEKLLNW SEMKANQSEQ RIFELLEAEP TASAPEWLKR LADKLPTKTL LHFAQESAGL GLTYWSYQAN VNTINDLLSQ TQFDTLDPVN DDKEYTYRTV KMLSTLAAIT ADSITLSQYS AKGVNIAARE AERALLALQK QLPNMSKQLA EKLGVRSLQA YSQRLDTRLT AAPIKGLVVG ANVAMSFVYF WDAFTSRRSG NKQAYLGYRI GGVSSLLVAL SAIGGPVGAV LLAVGLTGLL FSAYQIGRYG KNSFENLLYS SFWGTSKYYP FWSDFKKQED IDTVQERIDV ITDVVSNNNK AVTSDNIKYF DAALNIESQE FLNYFYAPKL TIVDSSIRPY GSEPYRYNLS YVFVLPDFKM NVSQLHGSIY RELDDAKYAA YSVPEPDKAM TETFRSALAA AFEDRTLCIA KEDGLHVTVN VEFSHPARLI WCYEPTPNTV VPKRYLTNSG YISTSQIGML DEKPNTTPWG K
|
| |