Gene VIBHAR_03065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03065 
Symbol 
ID5552864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3087685 
End bp3089412 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content49% 
IMG OID640908547 
Producthypothetical protein 
Protein accessionYP_001446242 
Protein GI156975335 
COG category[R] General function prediction only 
COG ID[COG2985] Predicted permease 
TIGRFAM ID[TIGR01625] AspT/YidE/YbjL antiporter duplication domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTC TTTTTAGTTA CTTGTCCGAA AACCCATTCG TATTTCTGTT TTTATCACTC 
GCTATTGGTT ACCCGCTTGG CCGGTTAACT TTTAAAGGGG TGAGCTTAGG CACAACTGCA
GGCACATTGG TGGTGGGCGT TGCTCTAGCG CTGACTTCGT TCTCTGTCTA TGGATTAAAA
ATTGAAGAAC CCGGGCTGGT CTCAGACATC TTCCTAATGA TGTTTATGTA TGCCATCGGG
ATGAAAGTTG GCCCTCAATT CTTCTCTGGG TTGGCTCGCG GTGGCCTCGA CTTTGTCGTA
ATTGGCTTAA TTGTTGTGTT CAGCAATTTC GCAATTGTGG TCATCGGCGC CAAACTGATG
GGGTTAGAGC CCGGATATGC CGCGGGAATC ATCTCCGGTA GTTACACAGT GACGGCAGTG
ATGGGGGTCG CACAATCCGC CATCAGCTCT GGGGCATTTA CGCCACCAGA AGGCATGAGT
ATCGACCATG TTAGTGCGAA CATTGCTGCA GGCTACGCGA TTAGCTACGT CTTATCGACC
GTACTCATTA TCCTATTTAT CAAGTACCTT CCTTCCCTTT TTGGTATCGA CCCTGTGAAA
GCAGGTAAAG ACGCCGAAGC GGAATTCTCG ACGGGTGACG ACGATGAGAA GCTACCAAGT
ACGTTTGGTT TTTCAGATGT TGGCGTCCTT CCAATTGATG TTCGCGCTTA TAAAGTGACA
CATCAGGAAC TCGTCGGGCG TTCAGTCCAG GAGCTGTACC AGTCTTTCCC TGACGCAGCG
GTCCTAAAAG TCGTACGAGG CGATGAAGTG ATCGACGCTT CGCAGAATCC AACTCTAGCT
CTTAATGACG TGATTGGTAT TCGCGGTGAA TATCGCGTGT TAATTGCGGA AGGTGAGGCC
GATATTGGGA ACGAGGTTGA TGAGCCGCGT GCGAGAAATG TCGATATTGA AGTCGCCGAC
ATCCACGTAG GTAAGTCTGA GCATGCTGGT AAAACCATTG CTCAATTACA TGCTGAAGTG
GGTTTTGGTG TTTATTTCAA AGCGATATTC CGACAAGGCC ACCAGCAGCC TTTATTACCT
CAAACCAAAG TCGAAGTTGG GGATGTCATT CGTATCGCTG GCTCCAAATG GTGTGTCGAA
AAAACCGCGT CACAACTGAA CAGTGTTGCC ATTGTTGAGA GCACGGTGAC AGAGACTTTT
TATCTCGCCC TATCATTGCT TATTGGCTAC ATTTTCGGTC ACTTTAGCGT CACGTTAGCG
GGGATTCCAT TTGCACTTGG TACCTCTGCA GGCTGCATGT TGACTGGTAT TGTGTTCTCC
TTCCTACGAA CACGAAACCC TGCCTTTGGC GGACCAATGA GCGAAGGCGC AAGAAGCTTC
TTACAAGATA TTGGTCTTAA CCTGTTTGTT GCTGTGCTTG CCGCTACAGT AGGTCCAAAA
ATCTTGGCCT CGTTTCAAGG CATTATCGTC ATAAAAATAG CGTTACTTGG TGTGACAGCC
GCTTTGGTGC CTCCGTTGCT GGCTTGGTTG TATGGTTTGT ACTTCCGTAA AATGAACCCG
GCAATTTTGG CAGGCGCCTG TGCCGGAGGC CGAAATAGCA CGCCCGCAAT GAAAGGAGCT
CAAGATGCGA GTCAAAGTGA TATGCCAGCC ATCGGCTACC CTGTCCCTTA CGCCCTGACT
TCTGTCTTAG TGTTGATTTT GGGCTACATT GCAATGGTCA TTAGTTGA
 
Protein sequence
MSFLFSYLSE NPFVFLFLSL AIGYPLGRLT FKGVSLGTTA GTLVVGVALA LTSFSVYGLK 
IEEPGLVSDI FLMMFMYAIG MKVGPQFFSG LARGGLDFVV IGLIVVFSNF AIVVIGAKLM
GLEPGYAAGI ISGSYTVTAV MGVAQSAISS GAFTPPEGMS IDHVSANIAA GYAISYVLST
VLIILFIKYL PSLFGIDPVK AGKDAEAEFS TGDDDEKLPS TFGFSDVGVL PIDVRAYKVT
HQELVGRSVQ ELYQSFPDAA VLKVVRGDEV IDASQNPTLA LNDVIGIRGE YRVLIAEGEA
DIGNEVDEPR ARNVDIEVAD IHVGKSEHAG KTIAQLHAEV GFGVYFKAIF RQGHQQPLLP
QTKVEVGDVI RIAGSKWCVE KTASQLNSVA IVESTVTETF YLALSLLIGY IFGHFSVTLA
GIPFALGTSA GCMLTGIVFS FLRTRNPAFG GPMSEGARSF LQDIGLNLFV AVLAATVGPK
ILASFQGIIV IKIALLGVTA ALVPPLLAWL YGLYFRKMNP AILAGACAGG RNSTPAMKGA
QDASQSDMPA IGYPVPYALT SVLVLILGYI AMVIS