Gene VIBHAR_03003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03003 
Symbol 
ID5554436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3022214 
End bp3023782 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content48% 
IMG OID640908485 
Producthypothetical protein 
Protein accessionYP_001446181 
Protein GI156975274 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTA GTATAATAAA TGCCATGAAA AAGACGCCAA ATATTAACCC AGAAAGCCAA 
GATGTTGCCA AGCTACAAGC GATGGTGAAA GCCCTTCTGC TCTCTCAGGA GCGGAAGGAG
TCTCAATGGA AACAAGAGCG TCAATCCTTA CTCGAACAGC TCAAGCTGGC CTTCGACCGT
CAGTTCGCGA AACGCTCCGA GGCGCTAAAG CCTTACGATG AATCTCAAGG TGACCTCTTC
AACGAAGTGG AATGTGAAGC CGCTAAGGAA GAAGAGGTTG AAGTGGTCAC GACGACCACT
ACAACGAAGA AGCGTGGTAA ACGCAAGCCC CTTCCAAAGA CTTTGCCTCG TGAGGTTATC
GAACTCGATT TAGACGACCA TGAAAAACAG TGTGCCTGCT GCCAACATAG TCTGCATAAA
ATCGGTGAAG ACCGTAGTGA GAAACTTGAG TTCTCACCAG CAATGCTCAA AGTGCTGGAA
TATGTTCGTC CTAAATATGC TTGTCGTCAG TGTGAGCAAA CTGAAGACAA CAGCCACATC
GTTCAAAAGC CAGCGCCTCA GAGCATCATC CCTAAAAGCT TCGCGACAGA AAGCTTGCTG
GCCAATATCA TCCTTGGTAA ATATCAATAC GCAATGCCCC TTTACCGCCA AGAGTCGCTG
TTTACTCAGT CGGGTATTGA GCTATCGCGA ACTACCATGG CAAGGTGGGT TATCCAAGTC
AGTGAGAAGT TCACACCGCT GTATGCGGCC TTAAAAGCGC ATCTACTTCA ACAAGTGGTG
GTTCAGGCGG ATGAAACGCC GCTCAATGTC CTTAAAGAAG ATAAAAAGTG TTATATGTGG
CTCTACTGCT CGGGCGCAGA CTCGCCCGAC GCTGCACTGC CGAATGTAAA GAATATCGCC
TTGTACGACT ATCAAAACAG TCGCGCGAGG GTATGCCCTG TTGCCTTCTT GGGGGATTAC
AGTGGTTATC TGCAAACCGA TGGCTATGGT GCCTATGATG GTCTTCATCA CGTAACCAAT
GTGGGTTGCT TGGCGCATGC ACGGCGTAAG TTCATGGATG CTAAGAAGCT TCAAGGTAAA
GGTAAGTCAG GCAAAGCAGA TAAAGCGCTG GCCAAAATCC AGAAGCTCTA TGGGATAGAA
TCGCGCTTAA AAGGTGCGAC TGTCGAAACG CGAAAAGCAG AACGTCAACA GCATGCCAAG
CCGATACTGG ATGAGCTGCA CGACTGGATG ACGTCTCAAC AAGTAATAAG CTCTAGTCCA
TTAGGAAAAG CGATTAAGTA TACGCTCGGC CAATGGCCCA AGCTCATCCG CTATATCGAT
GACGGTCATT TATCTATCGA TAATAATCGT GCTGAACGCG CCATTAAACC GCTGGTCATT
GGCAGAAAAA ATTGGCTGTT CTCAAACACA CCAAATGGTG CTGATGCGAG CGCGATGCTT
TACAGCATCG TCGAGACAGC GAAAGCCAAC GGCCTTATCC TCTACGACTA CATGGTCAAG
TGCATGAAAG AGCTCGCGAA AGCTGAGCCT GATATCGATG CGCTCCTACC TTGGAACTTC
AAACATTAA
 
Protein sequence
MIFSIINAMK KTPNINPESQ DVAKLQAMVK ALLLSQERKE SQWKQERQSL LEQLKLAFDR 
QFAKRSEALK PYDESQGDLF NEVECEAAKE EEVEVVTTTT TTKKRGKRKP LPKTLPREVI
ELDLDDHEKQ CACCQHSLHK IGEDRSEKLE FSPAMLKVLE YVRPKYACRQ CEQTEDNSHI
VQKPAPQSII PKSFATESLL ANIILGKYQY AMPLYRQESL FTQSGIELSR TTMARWVIQV
SEKFTPLYAA LKAHLLQQVV VQADETPLNV LKEDKKCYMW LYCSGADSPD AALPNVKNIA
LYDYQNSRAR VCPVAFLGDY SGYLQTDGYG AYDGLHHVTN VGCLAHARRK FMDAKKLQGK
GKSGKADKAL AKIQKLYGIE SRLKGATVET RKAERQQHAK PILDELHDWM TSQQVISSSP
LGKAIKYTLG QWPKLIRYID DGHLSIDNNR AERAIKPLVI GRKNWLFSNT PNGADASAML
YSIVETAKAN GLILYDYMVK CMKELAKAEP DIDALLPWNF KH