Gene VIBHAR_03001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03001 
Symbol 
ID5552852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3020752 
End bp3021261 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID640908483 
Producthypothetical protein 
Protein accessionYP_001446179 
Protein GI156975272 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3451] Type IV secretory pathway, VirB4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCTT TGGATGACGC CAAAATCATG GCAACCATAA GCCTTAACGG AATACCCTTC 
GAGTCAGAAT CTTACAACAC GCTCAAACCT TCCTTTGAGC TCGTAAAAAA CATCCTTAGC 
ACCCTCGCCA GAAAGTACGG CAGTCAGCTT GCCATTTGGA CACACATCGT CAAACGCAAA 
GAACGCTTTG AAGCCAATTA TCGCTTCGAG AGCGACTTCA TGCAGCGCTT TTCTGACCGT 
TACCTGCAAG ACTTTTCCGG TGAGGATTTT TTCAGTGTCC GTTACTACAT CACCTTTGTA 
CTCAACTACA AAGGCACACT CATCGAAGGA GAAGATGAGC TTGGTGATAT TCTCAAGACG 
AGTTCAGCCG CATTAAAGCG TTTTGATAGT AAAGTGCTTG AAGTCGGTGA CAATCACCGC 
TGCGAACACG TTGAGTTTCT TTCTTACCTT CTCAACTACA ACGACCAACC TAAGCCACTT 
GCGTCAGAAA AAGTGGGCTT TGTTGCTTAA
 
Protein sequence
MLSLDDAKIM ATISLNGIPF ESESYNTLKP SFELVKNILS TLARKYGSQL AIWTHIVKRK 
ERFEANYRFE SDFMQRFSDR YLQDFSGEDF FSVRYYITFV LNYKGTLIEG EDELGDILKT 
SSAALKRFDS KVLEVGDNHR CEHVEFLSYL LNYNDQPKPL ASEKVGFVA