Gene VIBHAR_02990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02990 
Symbol 
ID5553017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3013916 
End bp3014797 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content46% 
IMG OID640908472 
Producthypothetical protein 
Protein accessionYP_001446168 
Protein GI156975261 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT GGCTAGTAAC CAGTGGTGTC CTGATGTCTT TACTCAGCGC AAACAGCTTT 
GCGTCGATGG GAAAGCGCTA CGTTGCCACA CCGCAGCAAT CACAGTGGGA AATGGTGATG
AATACGCCGT TGGAGTGTCA GCTGGTGCAT CCAATCCCAG GATTTGGTGA CGCGGTATTT
TCATCTCATG CAAGTAAAAA AATCAATTTG GATTTTGAAT TGAAGATGCT CCGCCCTATG
GGTGAAACGC GCAATGTCAG TTTGATTTCT ATGCCACCAC CTTGGCGTCC GGGCGAGAAT
GCTGATCGCA TTACTAACCT TAAATTTTTC AAACAGTTTG ATGGTTACGT TGGTGGACAA
ACTGCTTGGG GCATTCTCTC TGAGCTAGAA AAAGGCCGCT ATCCAACGTT TAGCTACCAA
GACTGGCAGA GCCGAGATCA ACGTATTGAG GTCGCATTGT CTTCGGTACT GTTCCAAAAC
AAATACAACG TCTTTAGCAG CTGCATTGCT AACTTACTGA AGTACAGCTT TGAAGATATT
GCTTTCACGA TTCTTCACTA TGAGCGTCAA GGTGATCAGT TAACTAAAGC TTCGAAGAAA
CGTTTAGCGC AAATCGCTGA TTACGTTCGC CATAACCAAG ATATCGATTT GGTGTTAGTG
GCGACATACA CAGATTCGAC AGATGGTAAA AGTACGAGTC AAAGCTTATC TGAACGACGA
GCGGAATCAT TGCGCAGTTA CTTCGAATCT TTGGGCTTAT CTGGAGAGCG TATTCAAGTG
CAAGGCTACG GTAAGCGTCG TCCGATTGCA GATAATGGGT CACCAATAGG TAAAGACAAG
AACCGTCGCG TGGTGATTTC ACTAGGGCGC ACCCAGGTTT GA
 
Protein sequence
MNKWLVTSGV LMSLLSANSF ASMGKRYVAT PQQSQWEMVM NTPLECQLVH PIPGFGDAVF 
SSHASKKINL DFELKMLRPM GETRNVSLIS MPPPWRPGEN ADRITNLKFF KQFDGYVGGQ
TAWGILSELE KGRYPTFSYQ DWQSRDQRIE VALSSVLFQN KYNVFSSCIA NLLKYSFEDI
AFTILHYERQ GDQLTKASKK RLAQIADYVR HNQDIDLVLV ATYTDSTDGK STSQSLSERR
AESLRSYFES LGLSGERIQV QGYGKRRPIA DNGSPIGKDK NRRVVISLGR TQV