Gene VIBHAR_02979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02979 
Symbol 
ID5553314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3002476 
End bp3004020 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content49% 
IMG OID640908461 
Producthypothetical protein 
Protein accessionYP_001446157 
Protein GI156975250 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CGCCAGTTAT CAACCCAGAA AGCCAAGATG TTGCCAAGCT ACAAGCGATG 
GTGAAAGCCC TTCTGCTCTC TCAGGAGCGG AAGGAGTCTC AATGGAAACA AGAGCGTCAA
TCCTTACTCG AACAGCTCAA GCTGGCCTTC GACCGTCAGT TCGCGAAACG CTCCGAGGCG
CTAAAGCCTT ACGATGAATC TCAAGGTGAC CTCTTCAACG AAGTGGAATG TGAAGCCGCT
AAGGAAGAAG AGGTTGAAGT GGTCACGACG ACCACTACAA CGAAGAAGCG TGGTAAACGC
AAGCCCCTTC CAAAGACTTT GCCTCGTGAG GTTATCGAAC TCGATTTAGA CGACCATGAA
AAACAGTGTG CATGCTGCCA ACATAGTCTG CATAAAATCG GTGAAGACCG CAGTGAGAAA
CTTGAGTTCT CACCAGCTGT GCTCAAAGTG CTGGAATATG TTCGTCCTAA GTATGCTTGT
CGTCAGTGCG AGCAAACTGA AGACAACAGC CACATCGTTC AAAAACCAGC GCCCCAGAGC
ATCATCCCTA AAAGCTTCGC GACAGAAAGC TTGCTGGCCA ATATCATCCT TGGTAAATAT
CAATACGCAA TGCCCCTTTA CCGCCAAGAG TCGCTGTTTA CTCAGTCGGG TATTGAGCTA
TCGCGAACTA CCATGGCAAG GTGGGTTATC CAAGTCAGTG AGAAGTTCAA ACCCCTCTAT
GCCGCCTTAA AAGAGCATCT ACTTCAACAA GTGGTGGTTC AGGCGGATGA AACGCCGCTC
AATGTCCTCA AAGAAGATAA ACAGTGTTAT ATGTGGCTCT ACTGCTCGGG CGCAGACTCG
CCCGACGCTG CACTGCCGAA TGTGAAGAAT ATCGCCTTGT ACGACTATCA AAACAGTCGC
GCGAGGGCAT GCCCTGTTGC CTTCTTGGGG AATTACAGTG GTTATCTGCA AACCGATGGC
TATGGTGCCT ATGATGGTCT TCATCACGTA ACCAATGTTG GTTGCTTGGC GCATGCACGG
CGTAAGTTCA TGGATGCTAA GAAGCTTCAA GGTAAAGGTA AGTCAGGCAA AGCAGATAAA
GCGCTGGCCA AAATCCAGAA GCTCTATGGG ATAGAATCGC GCTTAAAAGG TGCGACTGTC
GAAACACGAA AAGCAGAACG TCAACAGCAT GCCAAGCCGA TACTGGATGA GCTGCACGAC
TGGATGACGT CTCAACAAGT AATAAGCTCT AGTCCATTAG GAAAAGCGAT TAAGTATACG
CTCGGCCAAT GGCCCAAGCT CATCCGCTAT ATCGATGACG GTCATTTATC TATCGATAAT
AATCGTGCTG AACGCGCCAT TAAACCGCTG GTCATTGGCA GAAAAAATTG GCTGTTCTCA
AACACACCAA ATGGTGCTGA TGCGAGCGCG ATGCTTTACA GCATCGTCGA GACTGCAAAA
GCCAACGGCC TTATCCTCTA CGACTACATG GTCAAGTGCA TGAAAGAGCT CGCGAAAGCT
GACCCTGATA TCGATGCACT CCTGCCTTGG AACTTCAAAC ATTAA
 
Protein sequence
MKKTPVINPE SQDVAKLQAM VKALLLSQER KESQWKQERQ SLLEQLKLAF DRQFAKRSEA 
LKPYDESQGD LFNEVECEAA KEEEVEVVTT TTTTKKRGKR KPLPKTLPRE VIELDLDDHE
KQCACCQHSL HKIGEDRSEK LEFSPAVLKV LEYVRPKYAC RQCEQTEDNS HIVQKPAPQS
IIPKSFATES LLANIILGKY QYAMPLYRQE SLFTQSGIEL SRTTMARWVI QVSEKFKPLY
AALKEHLLQQ VVVQADETPL NVLKEDKQCY MWLYCSGADS PDAALPNVKN IALYDYQNSR
ARACPVAFLG NYSGYLQTDG YGAYDGLHHV TNVGCLAHAR RKFMDAKKLQ GKGKSGKADK
ALAKIQKLYG IESRLKGATV ETRKAERQQH AKPILDELHD WMTSQQVISS SPLGKAIKYT
LGQWPKLIRY IDDGHLSIDN NRAERAIKPL VIGRKNWLFS NTPNGADASA MLYSIVETAK
ANGLILYDYM VKCMKELAKA DPDIDALLPW NFKH