Gene VIBHAR_02970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02970 
Symbol 
ID5554534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2995841 
End bp2996494 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID640908452 
Productendonuclease III 
Protein accessionYP_001446148 
Protein GI156975241 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG TCAAAAGAAT TGAAATTCTC GAACGACTAC GAGAAAACAA TCCCAATCCT 
CAGACGGAGC TTAACTGGAG CACACCGTTT GAGTTGCTTA TCGCCGTACT GCTTTCTGCG 
CAGGCGACAG ACGTAAGTGT AAACAAAGCA ACAGACAAGC TTTACCCTGT AGCGAACACA 
CCACAAGGCA TTCTTGATTT GGGTGTCGAT GGTTTAAAGG AATACATCAA AACCATCGGT 
CTGTTTAATT CAAAAGCCGA AAACACCATC AAGACTTGCA AGATCTTGCT AGAGAAGCAC 
AACGGCGAAG TGCCAGAAGA TCGTGCAGCA CTTGAAGCTT TGCCGGGTGT AGGTCGTAAA 
ACCGCTAACG TGGTACTGAA TACCGCCTTC GGTTGGCCAA CTATCGCAGT GGACACGCAC 
ATCTATCGTG TTTCTAACCG TACAAAGTTT GCGATGGGTA AAACCGTCGA CGACGTAGAA 
GAAAAACTTC TTAAAGTGGT GCCAAAAGAG TTTAAGCTTG ATGTACACCA CTGGCTGATC 
CTTCATGGTC GCTATACCTG TGTGGCGAGA AAGCCTCGCT GTGGCAGCTG TATCATCGAA 
GATCTGTGTG AATACTCTCC ACCAAAAGAA AACGTAAAGA AAAAGAAGAA ATAA
 
Protein sequence
MNKVKRIEIL ERLRENNPNP QTELNWSTPF ELLIAVLLSA QATDVSVNKA TDKLYPVANT 
PQGILDLGVD GLKEYIKTIG LFNSKAENTI KTCKILLEKH NGEVPEDRAA LEALPGVGRK 
TANVVLNTAF GWPTIAVDTH IYRVSNRTKF AMGKTVDDVE EKLLKVVPKE FKLDVHHWLI 
LHGRYTCVAR KPRCGSCIIE DLCEYSPPKE NVKKKKK