Gene VIBHAR_02967 details

Gene Information

• Locus tag: VIBHAR_02967
• Symbol: rnfD
• ID: 5555934
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 2993444
• End bp: 2994430
• Gene Length: 987 bp
• Protein Length: 328 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640908449
• Product: electron transport complex protein RnfD
• Protein accession: YP_001446145
• Protein GI: 156975238
• COG category: [C] Energy production and conversion
• COG ID: [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
• TIGRFAM ID: [TIGR01946] electron transport complex, RnfABCDGE type, D subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATGGG TAGCGCTGTG CGCTATTCCT GGCTTAGTAG CTCAAACCTA CTTCTTTGGT 
TGGGGCACCA TCATTCAACT CGTGTTCGCT ATCGCGGTCG CAGTGTCACT TGAAGCATTA 
GTCATGCTTG TGCGTAAGCG TTCTCCAATG CGTGCGCTAC GTGATAACAG TGCCATCGTG 
ACGGCATGGC TATTAGCTGT GGCAATCCCA CCATGGTCCC CTTGGTGGAT CATGGTTATC 
GGTTTGATTT TTGCCATCGT TATTGCAAAG CACTTATACG GTGGTATTGG TCAAAACCTA 
TTTAACCCAG CAATGGTCGC TTACGTTGTA TTGCTTATCT CCTTCCCTGT CCAAATGACA 
AGTTGGAGCG CGCCTGTTTC ATTGATGTCT GAGCATGTGA CTTTTGCAGA CGCGTTGTCT 
CTGATCTTCA CTGGCTATGA CTTTGATGGG TTGTCGCTGC AACAAGTTCG CGCTGGTGTG 
GATGGCGTGA CAATGGCAAC TCCATTAGAT GCATTCAAAA CCGGTATTCA TACCGGAGCA 
ACGCCAAGTG AGGTGCTTTC ACAGCCAATG TTTGGTGGGC TTGCGGGTAT CGGTTGGCAA 
TGGGTAAACC TAGCTTACTT GGTTGGTGGA CTAGTGATGA TCAAGAAACG CATCATCCAA 
TGGTACATTC CTGTTGGTTT CCTAGGTAGT TTGGCACTGT TTAGTACCGT GTTTAGCTTG 
CTCATGCCGG GAGAAACCGC GTCACCAATC TTCCACCTAC TTTCAGGTGC AACGATGTTA 
GGCGCGTTCT TTATCGCTAC CGACCCTGTT TCAGCGTCAA CTACTGTGAA AGGTCGCTTG 
ATTTTCGGCG CTCTGATCGG TGCGTTGGTA TTCATTATTC GTAGTTGGGG TGGCTTCCCA 
GATGGCGTTG CATTCGCCGT TCTGCTTGCC AATATGTGTG TACCGTTGAT CGACTACTAC 
ACCAAACCAA GAACTTACGG TCACTGA 

 

Protein sequence

MKWVALCAIP GLVAQTYFFG WGTIIQLVFA IAVAVSLEAL VMLVRKRSPM RALRDNSAIV 
TAWLLAVAIP PWSPWWIMVI GLIFAIVIAK HLYGGIGQNL FNPAMVAYVV LLISFPVQMT 
SWSAPVSLMS EHVTFADALS LIFTGYDFDG LSLQQVRAGV DGVTMATPLD AFKTGIHTGA 
TPSEVLSQPM FGGLAGIGWQ WVNLAYLVGG LVMIKKRIIQ WYIPVGFLGS LALFSTVFSL 
LMPGETASPI FHLLSGATML GAFFIATDPV SASTTVKGRL IFGALIGALV FIIRSWGGFP 
DGVAFAVLLA NMCVPLIDYY TKPRTYGH