| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02966 |
|---|
| Symbol | |
|---|
| ID | 5554624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2990646 |
|---|
| End bp | 2993384 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640908448 |
|---|
| Product | electron transport complex protein RnfC |
|---|
| Protein accession | YP_001446144 |
|---|
| Protein GI | 156975237 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCTT TGATTGAACA AATTCGTACT GGTTCGCTAT GGGATTTCCC AGGCGGCGTG
CATCCGGCAG AAAACAAAAA GCAATCCAAC AAAACTGAAT TGGTTCATGC AGCCATTCCG
TCGGAAATCG TCCTACCTCT GAAACAACAC ATCGGTAAAG CAGGTAATCT ATTGATTGCT
GTTGGTGACA CAGTGTTGAA AGGTCAACAG CTAACGGCGT CAGACAGTGG TTTTACCGTT
CCTGTTCATG CTCCAACTTC TGGGCAAATA ACAGCTATTG AGCCACGCAC TGTTGCGCAC
CCATCAGGTT TGAGCGAACT GTGCGCAGTG ATGACGCCAG ATGGTAACGA TACTTGGTGT
GAGAAAACGC CAGTAGCCGA TTACACCCAA GAATCCGCTG ATGCATTGAT CGACGTGATC
CGCCTTGCTG GTATCTCTGG CATGGGTGGC GCAGGCTTCC CTACCGCTAA GAAGATCCAA
TCGGGTATTG CACGTACCGA AATTCTTATC GTTAATGCTG CAGAATGTGA ACCTTACATC
ACCGCCGATG ACAAACTCAT GCAGGAACAT GCAGACGAAC TGATCCAAGG TATCGAGATC
GTCGAGCATA TCCTTAAGCC AAAACTGACC ATCATTGGTA TTGAAGATAA CAAGCCAGCA
GCAATCAAAG CACTGGAACA AGCGGCGATG AACAAAGACA TCGTGATCCG CGTTATCCCA
ACCAAGTACC CTTCTGGTGG TGAGAAGCAG CTCATCAAGA TTTTGACCAA CAAAGAAGTT
CCTAGCGGCG CTATCCCTGC AGATATTGGC ATCCTGGTTC AAAACGTTGG TTCTCTCTAC
TCAATTAAAC GTGCAGTGAT CGATGGCGAA CCTGTGGTAA ATCGCATCGT GACTCTGACG
GGTAAAACCT TCAAGCAACC ACGTAACGTT TGGACGCTAC TTGGTACGCC AGTACAAGCA
CTGTTAGACG AGTTTGGCTA CAAAGCAGAT AAGAAACTGC AGCGCCTGAT CATGGGTGGT
CCAATGATGG GCTTTACACT CCCCCACGCT CAGGTTCCTA TCACTAAAAC GGCAAACTGT
ATTCTGGCAC CGAAGCGTCG TGAGATCGCC TCTGACCAAT ACGAAATGGA ATGTATCCGT
TGTAGCCAAT GTGCGGAAGC GTGCCCTGCC TCGCTATTGC CACAGCAGCT TCAGTGGTAT
GCAAAAAGCC AAGAATACGA AAAGCTTGAA GAACTGAACC TTAAAGATTG TATTGAATGT
GGCGCGTGTG CATTTGTGTG CCCAAGTGAA ATTCCACTTG TTCAATACTA TCGCCAAGCG
AAAGCTGAAA TCCGTACACG CGCTCAAGAA GCCGCAGCAG CTGAACGAGC TAAGCTGCGC
TTTGAAGAGA AGAAAGCGCG TATGGAACGC GAAAAAGCAG AACGTGAAAA TCGCTTTAAG
AAAGCCGCGG ATGATCGTCG TAAAGACATG AAAGCCTCTG GCGGTGACGA TGCGATTGCT
GCAGCCATCG CTCGCGTGAA AGCACAAAAA GACAATGCCG AAGCCAAAGC GGAACCAGCT
GTGAAACCTG CGGTTGCAGC CGCGATTGCC AAAGCAAAAG CGAAACAAGC TGCGGCGGCT
CAATCTGGTG CAGCGGAGCC TGATAACTCA GAAATGGCGA AGCTACGCGA AGAACGCAAA
CGTATTGCTC GCGAGCGCAA AGCGGCAAAA GAACAAGATG ACACATCTGC GGATAATGCT
GACGATAAGA AGTCTGCGGT TGCAGCCGCT ATTGCTCGTG CTAAGGCGAA GAAAGCTCAG
CAAGAAGACG CATCAACACC TACTGAAGCT GGTGATAAGA AAGCAGCCAT CGCGGCAGCT
ATCGCCAGAG CTAAAGCGAA AAAAGCACAA CAAGAAGATT CGACCGAATC TGTAGAAACG
GAAGCACCTG TTAAACAAGC TGAAGATCCG AAGAAAGCCG CTGTTGCTGC AGCGATTTCT
CGTGCCAAAG CACGTAAAGC TCAGCAAGAA GGTTCTACAG AATCTGAAGA AACGGAAGCG
CCTGCTAAAC AAGCTGAAGA TCCGAAGAAA GCAGCAGTTG CCGCTGCCAT TGCTCGTGCT
AAAGCGCGTA AAGCTCAGCA AGAAGGTTCT ACTGAGTCTC TAGAAACGGA TGCGCCTGCT
GAACCAGCAG AAGATCCAAA GAAAGCAGCA GTTGCCGCTG CCATTGCTCG TGCCAAAGCA
CGTAAAGCTC AGCAAGAATC GCAAACAGAA CCTGTTGAAG CGGAAGCTCC TTCTGAAGAG
CCAGAAGTCG ATCCGAAGAA AGCCGCTGTT GCCGCAGCTA TTGCTCGTGC TAAAGCACGT
AAAGCGCAGC AAGAGGCACA AACAGAATCT GTTGAAGCGG AAGCTCCTTC TGAAGAACCA
GAAGTGGATC CGAAGAAAGC CGCGGTTGCC GCAGCTATTG CTCGCGCAAA AGCACGCAAA
GCTCAGCAAG AAGCACAAAC AGAATCTGTT GAAGCGGAAG CTCCTTCTGA AGAGCCAGAA
GTGGATCCGA AGAAAGCCGC GGTTGCCGCA GCTATTGCTC GCGCTAAAGC ACGCAAAGCT
CAGCAAGAAG CACAAACAGA ATCTGTTGAA GCGGAAGCTC CTTCTGAAGA GCCAGAAGTG
GATCCAAAGA AAGCTGCTGT TGCCGCTGCC ATTGCTCGCG CTAAAGCACG TAAAGCTCAG
CAAGAAGCGA ATAAGAACAA TACTGAGGAG AACGAGTAA
|
|---|
| Protein sequence | MLSLIEQIRT GSLWDFPGGV HPAENKKQSN KTELVHAAIP SEIVLPLKQH IGKAGNLLIA
VGDTVLKGQQ LTASDSGFTV PVHAPTSGQI TAIEPRTVAH PSGLSELCAV MTPDGNDTWC
EKTPVADYTQ ESADALIDVI RLAGISGMGG AGFPTAKKIQ SGIARTEILI VNAAECEPYI
TADDKLMQEH ADELIQGIEI VEHILKPKLT IIGIEDNKPA AIKALEQAAM NKDIVIRVIP
TKYPSGGEKQ LIKILTNKEV PSGAIPADIG ILVQNVGSLY SIKRAVIDGE PVVNRIVTLT
GKTFKQPRNV WTLLGTPVQA LLDEFGYKAD KKLQRLIMGG PMMGFTLPHA QVPITKTANC
ILAPKRREIA SDQYEMECIR CSQCAEACPA SLLPQQLQWY AKSQEYEKLE ELNLKDCIEC
GACAFVCPSE IPLVQYYRQA KAEIRTRAQE AAAAERAKLR FEEKKARMER EKAERENRFK
KAADDRRKDM KASGGDDAIA AAIARVKAQK DNAEAKAEPA VKPAVAAAIA KAKAKQAAAA
QSGAAEPDNS EMAKLREERK RIARERKAAK EQDDTSADNA DDKKSAVAAA IARAKAKKAQ
QEDASTPTEA GDKKAAIAAA IARAKAKKAQ QEDSTESVET EAPVKQAEDP KKAAVAAAIS
RAKARKAQQE GSTESEETEA PAKQAEDPKK AAVAAAIARA KARKAQQEGS TESLETDAPA
EPAEDPKKAA VAAAIARAKA RKAQQESQTE PVEAEAPSEE PEVDPKKAAV AAAIARAKAR
KAQQEAQTES VEAEAPSEEP EVDPKKAAVA AAIARAKARK AQQEAQTESV EAEAPSEEPE
VDPKKAAVAA AIARAKARKA QQEAQTESVE AEAPSEEPEV DPKKAAVAAA IARAKARKAQ
QEANKNNTEE NE
|
|---|
| |