| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02963 |
|---|
| Symbol | |
|---|
| ID | 5554796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2986852 |
|---|
| End bp | 2989149 |
|---|
| Gene Length | 2298 bp |
|---|
| Protein Length | 765 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908445 |
|---|
| Product | pyruvate-formate lyase |
|---|
| Protein accession | YP_001446141 |
|---|
| Protein GI | 156975234 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1882] Pyruvate-formate lyase |
|---|
| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTC CGACGACTGA TATGCTAGAC GCATGGGCTG GATTCACCGC TGGTGAGTGG
CAAAACTCTG TCAACACTCG TGACTTCATC CAAAAAAACT ACACACCATA TGAGGGAGAC
GAGTCCTTCT TAGCCGAGGT TAGCGCATCT ACTTCAGCAT TATGGAACCA AGTGCTTGAA
GGCATTAAAC AAGAAAGCCG CACACACGCG CCTGTTGATT TCGATACCGA TCTGCCATCA
ACGATTACTT CTCACGATGC GGGTTACATC AACAAAGATC TGGAAAAGAT CGTTGGCTTA
CAAACCGATC AGCCTCTAAA ACGTGCAATC ATCGCTAATG GTGGTATTCG CATGGTGAAA
AACTCGTGCG AAGTTTATGG CCGCGAATTA GATCCGACGG TTGAAAAGAT CTTCACCGAA
TACCGTAAAA CTCACAACAA AGCGTGTTTC GACCTTTACA CCAAAGAAAT CTTAGCGTGT
CGTAAATCAG GCATCATCAC TGGTCTCCCT GATGCCTATG GTCGTGGTCG TATTATTGGT
GACTACCGTC GTATCGCCCT TTACGGTATC GACTTCTTAA AAGCGGACAA AAAAGAGCAA
TACAACTCGA CACAAACTTT CCTAGAGCGC GGTGGCGAAC TTGAGAAAAC GCTTCGTCTA
CGCGAAGAAA TTGCAGACCA AGTTCAAGCA CTTGAAGACA TTCGTCAAAT GGGTTTGAAA
TACGGCATTG ATATGTCACT ACCTGCAAAA ACAGCGCAAG AAGCGATTCA ATTTACCTAC
TTTGGTTACT TGGCCGCAGT TAAATCACAA AATGGCGCAG CAATGTCATT GGGTCGTACA
TCGACTTTCC TAGATGTTTA CCTAGAACGT GATATCGCAA ATGGCTTGAT TGATGAATCA
CAAGCGCAAG AGATGATCGA CCACTTCATC ATGAAACTGC GCATGGTTCG CTTCCTTCGT
ACACCAGAGT ACGATTCATT GTTCTCTGGC GACCCTATCT GGGCAACAGA AGCAATGGCA
GGTATGGGTG TTGATGGCCG TACACTAGTA TCTAAAACGA CATTCCGATA CTTACATACA
CTACATACTA TGGGCCCAGC ACCTGAGCCA AACATGACGA TTCTTTGGTC AGAGCAATTG
CCAGAAGCGT TCAAGCAATA CGCGGCAAAA GTGTCAATTG ATACCTCTTC TGTTCAATAC
GAAAACGACG ATCTAATGCG TCCTGATTTC GACAATGACG ACTACGCGAT TGCATGTTGT
GTGAGCCCGC AGATTGTTGG TCAACACATG CAGTTCTTTG GTGCACGTGC CAACCTTGCA
AAAGCGCTGC TTTACACTAT CAATGGTGGT ATCGATGAAA AATCGAAAGC GCAAGTTGGT
CCAGTCGTGG ACAAAGTTCA AGATGAAATT CTCGACTTTG ACGCTTTAAT GCCACGCTTC
GACAACATGT TGGAATGGCT AGCAACCCAA TACGTCACAG CGTTGAACAT CATCCATTAC
TCGCATGACC GTTACAGTTA CGAAGCATCA CTAATGGCAT TGATGGATCG CGACGTGCAC
CGCACTATGG CGTGTGGTAT TGCAGGTCTG TCTGTTGTCG CTGACTCTTT GGCGGCAATT
AAATACGCGA CCGTGAAACC TGTTCGTGAT GAAGATGGCA TCGCCGTGGA TTTTGAAATC
GAAGGTGATT ATCCAAAATT TGGTAACAAC GATGCCCGTG TTGATGACAT CGCTTGTGAT
CTGGTTGAAC GCTTCATGAA GAAAATTCAG AAGATGCACA CCTACCGCGA AGCTGTGCCA
ACTCAATCAA TACTAACGAT CACATCTAAC GTGGTTTACG GCAAAAAAAC GGGTAATACG
CCAGATGGCC GTCGCGCAGG TATGCCTTTT GGCCCTGGTG CAAACCCAAT GCACGGTCGT
GATGAAAAAG GTGCGGTTGC GTCTTTGGCA TCGGTATCTA AACTGCCGTT TGCTTACGCG
AAAGATGGTA TTTCTTACAC CTTTTCAATT GTGCCTAACG CACTGGGTAA AGACGAATTA
AGTCAGAAGA AAAACCTAGC CGCGCTAATG GATGGTTACT TCCATCACGA AGCAAGCAAC
GAGGGCATTG CGGTTGAAGG TGGTCAACAC CTCAACGTCA ACGTTCTGAA CCGAGAAATG
TTATTGGATG CGGTTGAACA TCCAGAGAAC TACCCTCAGT TGACGATTCG AGTGTCCGGC
TACGCGGTAC GTTTTAACTC GCTAACTCGA GAGCAACAAC AAGACGTGAT CAGCCGAACT
TTTACAGAAA AACTGTAA
|
|---|
| Protein sequence | MTIPTTDMLD AWAGFTAGEW QNSVNTRDFI QKNYTPYEGD ESFLAEVSAS TSALWNQVLE
GIKQESRTHA PVDFDTDLPS TITSHDAGYI NKDLEKIVGL QTDQPLKRAI IANGGIRMVK
NSCEVYGREL DPTVEKIFTE YRKTHNKACF DLYTKEILAC RKSGIITGLP DAYGRGRIIG
DYRRIALYGI DFLKADKKEQ YNSTQTFLER GGELEKTLRL REEIADQVQA LEDIRQMGLK
YGIDMSLPAK TAQEAIQFTY FGYLAAVKSQ NGAAMSLGRT STFLDVYLER DIANGLIDES
QAQEMIDHFI MKLRMVRFLR TPEYDSLFSG DPIWATEAMA GMGVDGRTLV SKTTFRYLHT
LHTMGPAPEP NMTILWSEQL PEAFKQYAAK VSIDTSSVQY ENDDLMRPDF DNDDYAIACC
VSPQIVGQHM QFFGARANLA KALLYTINGG IDEKSKAQVG PVVDKVQDEI LDFDALMPRF
DNMLEWLATQ YVTALNIIHY SHDRYSYEAS LMALMDRDVH RTMACGIAGL SVVADSLAAI
KYATVKPVRD EDGIAVDFEI EGDYPKFGNN DARVDDIACD LVERFMKKIQ KMHTYREAVP
TQSILTITSN VVYGKKTGNT PDGRRAGMPF GPGANPMHGR DEKGAVASLA SVSKLPFAYA
KDGISYTFSI VPNALGKDEL SQKKNLAALM DGYFHHEASN EGIAVEGGQH LNVNVLNREM
LLDAVEHPEN YPQLTIRVSG YAVRFNSLTR EQQQDVISRT FTEKL
|
|---|
| |