| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02955 |
|---|
| Symbol | |
|---|
| ID | 5553909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2978344 |
|---|
| End bp | 2979249 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640908437 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446135 |
|---|
| Protein GI | 156975228 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCT ACACCGATAA GAAAGTGGTC GCAGTTGGCG GTGGTCACGG TTTGGGCCGT
ATGTTAGCGG CATTAAAAGA TTTTGGCGGC AATGCAACTG GCATTGTTGC GACAACAGAT
AATGGCGGTT CTACGGGCCG TATTCGTCAT TGTCAGGGTG GTATTGCTTG GGGTGATACT
CGTAACTGTA TCAACCAGTT AATCACCGAA CCATCAATCA GCTCGATGAT GTTTGAGTAC
CGATTTAAAG GTACTGGCGA GTTAGATGGA CACAACCTAG GTAATTTGAT GCTGACGGCG
TTGGACAACC TGTCGGTAAG ACCACTAGAT GCGATCAACC TTATTCGCAA TATGCTGAAG
GTCGACGTAA ACATTCTGCC TATGTCTGAG CACCCTTCCG ACCTAACGGC TCTATCAATA
GATGGGCAGT GGGTCACAGG TGAAACCAAT GTGGATGAAA TGGAAACCGA TCTGCGTCGT
CTTGATCTGT CACCGGAAGT CCCTGCAACC AAAGAAGCAG TTACGACGCT TTCAGAAGCA
GATGTTATCA TTCTTGGTCC GGGAAGCTTC TTAACGAGCA TCATGCCGCC GCTATTGCTG
CCTGAAATTG GTAAAGCGAT TGCTGCTAAC CAAAAGGCAA AAGTCATCTT TGTGGCAAAC
TTGAGCCCAG AATATGGCCC AGCTGGCCGT ATGACGATGA AGCAAAAGCT TGAATGGTGC
GAGCGTGCGT GCCAAGGCCG TAAGATCGAT GTAGTACTCG CTGAGGAGAC TGAGCAAGAA
GTGCTGGATA ACTGGAACGT AGTCACTGAG TCATTGGCTT CAACGAACCG TGATTGGCGC
CACGACCGAG ACAAACTAAA GCTCGCGATT GAAAATCAAC TACTGTCTAA CGTATGCGCC
CCATGA
|
|---|
| Protein sequence | MNIYTDKKVV AVGGGHGLGR MLAALKDFGG NATGIVATTD NGGSTGRIRH CQGGIAWGDT
RNCINQLITE PSISSMMFEY RFKGTGELDG HNLGNLMLTA LDNLSVRPLD AINLIRNMLK
VDVNILPMSE HPSDLTALSI DGQWVTGETN VDEMETDLRR LDLSPEVPAT KEAVTTLSEA
DVIILGPGSF LTSIMPPLLL PEIGKAIAAN QKAKVIFVAN LSPEYGPAGR MTMKQKLEWC
ERACQGRKID VVLAEETEQE VLDNWNVVTE SLASTNRDWR HDRDKLKLAI ENQLLSNVCA
P
|
|---|
| |