Gene VIBHAR_02945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02945 
Symbol 
ID5555688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2969096 
End bp2970106 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID640908427 
Producthypothetical protein 
Protein accessionYP_001446125 
Protein GI156975218 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGGCT TGGAGCAAAT GAGTACAGAC AAAAAACTAA TTCTGGATGT ATCTGATTTG 
AAAGTTCACT TCAGCATTGC ATCAAAATCT GCATGGCCTT GGGCAAAACC TTCAAGCCTA 
AAAGCGGTAG ACGGCGTAAA TGTTCGTCTA TACCAAGGTG AGACTCTTGG TGTAGTAGGT 
GAGTCTGGTT GTGGTAAATC GACATTTGCT CGCGCGATCA TTGGTTTGGT TGAAGCAACA 
GATGGCGAAG TCGTTTGGTT AGGCCAAGAT CTAACGAAGA TGAAAGACGT CCAACGTCGT 
GAAACGCGCA AAGAAATCCA AATGATTTTC CAAGATCCTT TGGCTTCTTT GAACCCGCGT 
ATGACAGTGG GCGACATCAT CGCTGAGCCG CTAGAGACGT TCTACCCAGA ACTGACTAAG 
CAAGAAGTGA AAGACCGCGT TAAAGAAATG ATGGCGAAGG TAGGTCTACT GCCAAACGTG 
ATCAACCGTT ACCCACACGA GTTCTCAGGT GGTCAGTGTC AACGTATTGG TATCGCTCGT 
GCACTTATTC TAAAGCCGAA GATGATCATC TGTGACGAAC CTGTATCAGC ACTGGACGTA 
TCGATTCAAG CTCAGGTGGT TAACCTATTG AAAGAGCTTC AGAAAGAGCT TGGTCTTTCA 
TTAGTATTTA TCGCGCACGA TTTGTCAGTA GTGAAACACA TTTCTGACCG CGTACTGGTT 
ATGTACCTAG GTAACGCTGT TGAGTTGGGT GAAGCGGAGG CATTGTTTGC CGATCCAAAA 
CATCCATACA CACGTGCATT GATGTCGGCA GTTCCGATCC CAGATCCTGA ATTAGAGCGC 
AACAAAAGCA TTCAGATGCT GGAGGGTGAT CTACCATCGC CAATCAGTCC ACCATCAGGT 
TGTGTGTTCC GTACCCGTTG CCCACAAGCA ACAGAAGAAT GTGCGAAGAC TAAGCCACAC 
ATCGAAGGTT CTGACGTTCA CGCAGTATCT TGTCTACACG TAGCAGTGTA A
 
Protein sequence
MGGLEQMSTD KKLILDVSDL KVHFSIASKS AWPWAKPSSL KAVDGVNVRL YQGETLGVVG 
ESGCGKSTFA RAIIGLVEAT DGEVVWLGQD LTKMKDVQRR ETRKEIQMIF QDPLASLNPR 
MTVGDIIAEP LETFYPELTK QEVKDRVKEM MAKVGLLPNV INRYPHEFSG GQCQRIGIAR 
ALILKPKMII CDEPVSALDV SIQAQVVNLL KELQKELGLS LVFIAHDLSV VKHISDRVLV 
MYLGNAVELG EAEALFADPK HPYTRALMSA VPIPDPELER NKSIQMLEGD LPSPISPPSG 
CVFRTRCPQA TEECAKTKPH IEGSDVHAVS CLHVAV