Gene VIBHAR_02940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02940 
Symbol 
ID5555113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2962246 
End bp2963214 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content50% 
IMG OID640908422 
Producthypothetical protein 
Protein accessionYP_001446120 
Protein GI156975213 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA CGAAACGTAT ACTTGCCACT GCTATTCTTG CCGCAACCAC TGCTTTCTCC 
TCTGCTAGTG TGCTTGCCAA TACCGCGACC GTTGCGGTTT CTCAAATCGT AGAACATCCA 
GCACTCGACG CGACTCGTCA AGGCTTGATA GATGGCTTGA AAGCCAAGGG CTATGAGCAA 
GGTAAGAACC TAGAGTTTGA CTACAAGACC GCGCAAGGTA ACCCAGCTAT AGCGGTACAG 
ATTGCACGTC AATATGTGGG TGAGAGCCCA GATGTACTGG TGGGCATTGC AACACCGTCA 
GCGCAAGCTT TGGTGTCTGC AACACGTTCT ATCCCAGTGG TGTTTACTGC GGTAACGGAT 
CCGGTTGGCG CAAAGCTTGT GAAATCCATG CATAAGCCGG GTAAAAACGT CACCGGTCTT 
TCCGATTTGT CTCCTGTGGC ACAGCACGTT GCATTGATTC AAGAAATTCT GCCTGCGGCT 
AAATCTATCG GTGTGGTTTA CAACCCAGGT GAAGCAAACG CGGTGACTCT GGTGCAACTG 
CTAAAAGAGA GTGCAGAGGC CAACGGTCTT GAAGTGGTAG AAGCGACGGC TCTCAAAAGT 
GCCGATGTTC AGTTCGCGAC GCAAGCTATT GCGGCTAAAT CCGATGTGAT TTATGCGCCG 
ACAGACAACA CGGTAGCCAG TGCTATTGAG GGCATGATCG TTGCGGCAAA CCAAGCGAAG 
AAGCCGGTCT TTGGCGGTGC AACCTCTTAC GTAGAAAAAG GCGCTATTGC GAGCTTGGGT 
TTTGATTACT ACCAAGTGGG TGTTCAAACT GCCGACTACG TTGCTGCTAT TTTGGAAGGG 
CAAGATCCTG GCAAGCTGGA TGTGAAAGTC GCAACCGGTT CTGATCTTGT TGTGAATGAA 
GGAGCCGCAA CCAAACTTGG CATTCAACTA CCGAGTTCTG TTGTGAAACG TGCGACTAGC 
ATGCAGTAA
 
Protein sequence
MMKTKRILAT AILAATTAFS SASVLANTAT VAVSQIVEHP ALDATRQGLI DGLKAKGYEQ 
GKNLEFDYKT AQGNPAIAVQ IARQYVGESP DVLVGIATPS AQALVSATRS IPVVFTAVTD 
PVGAKLVKSM HKPGKNVTGL SDLSPVAQHV ALIQEILPAA KSIGVVYNPG EANAVTLVQL 
LKESAEANGL EVVEATALKS ADVQFATQAI AAKSDVIYAP TDNTVASAIE GMIVAANQAK 
KPVFGGATSY VEKGAIASLG FDYYQVGVQT ADYVAAILEG QDPGKLDVKV ATGSDLVVNE 
GAATKLGIQL PSSVVKRATS MQ