Gene VIBHAR_02938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02938 
Symbol 
ID5553904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2960464 
End bp2961258 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID640908420 
Producthypothetical protein 
Protein accessionYP_001446118 
Protein GI156975211 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC TCAATGATAT TCAAGTGACC TTCAATCCCG GAACCATTCT GGAAAACAGA 
GCCTTGAAAG GTGTTTCGTT AGAAGTGCCT GAACATCAGT TTCTCACCGT TATTGGCTCC
AATGGAGCAG GGAAGTCAAC CCTGCTTGGA GCCGTGACAG GAGAGACGCC GATGATTGGC
GGCCAAGTGA TCATTGATGG ACAAGACGTA ACCCGTAAGA CGGTTGCACA ACGCGCCACT
CAATGTGCTC GCGTATTCCA AGACCCACTA GCTGGTACTT GTGGGGATTT GTCGATTGAA
GAAAACATGG CGCTTGCTTA CATGCGGGGT CAGCGTCGCG GGTGGGGGAT GGCGCTATCA
GCGAAACGTC GCAAGCTGTT TCAAGAGCGC ATCAGCATTC TTGGTTTAGG GTTGGAAGAT
CGCTTGGGGG ACAGCATTGG GCTACTTTCT GGCGGTCAGC GTCAAGCAGT TAGTCTGGTT
ATGGCAACAC TATCAGACAG TAAACTACTC CTGCTTGATG AACACACCGC CGCGTTAGAC
CCTCGTATGG CGGCTTTTGT TATCGACCTG ACCAAGCGCA TTGTCACTGA GTTTAATCTT
ACGGTTATGA TGGTGACACA CTCGATGAAG GATGCTCTGG CCTGTGGTGA CAGAACGGTC
ATGTTGCACC AAGGTGAGAT TGTTCTTGAT GTAGCGGGTG AGCAAAGAGC GAATATGCAA
GTTCCAGACT TATTGGAAAT GTTTTCTAAA GTGCGTGGAG AAGAGTTGGC AGATGATAGC
TTGTTGCTGA ACTAG
 
Protein sequence
MIELNDIQVT FNPGTILENR ALKGVSLEVP EHQFLTVIGS NGAGKSTLLG AVTGETPMIG 
GQVIIDGQDV TRKTVAQRAT QCARVFQDPL AGTCGDLSIE ENMALAYMRG QRRGWGMALS
AKRRKLFQER ISILGLGLED RLGDSIGLLS GGQRQAVSLV MATLSDSKLL LLDEHTAALD
PRMAAFVIDL TKRIVTEFNL TVMMVTHSMK DALACGDRTV MLHQGEIVLD VAGEQRANMQ
VPDLLEMFSK VRGEELADDS LLLN